Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PCDH17O14917 Y_RNA.301-201ENST00000364990 103 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AL356432.1-201ENST00000405809 419 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 RNU2-41P-201ENST00000410991 178 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AC023141.4-201ENST00000412031 328 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDH17O14917 PTGES3P4-201ENST00000426243 356 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH17O14917 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH17O14917 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH17O14917 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH17O14917 AC012308.1-201ENST00000451232 178 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH17O14917 RNU6-507P-201ENST00000516045 100 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 Y_RNA.691-201ENST00000516611 103 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH17O14917 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH17O14917 AC020895.1-201ENST00000595362 272 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH17O14917 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH17O14917 LARP7P1-201ENST00000605576 316 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 uc_338.15-201ENST00000615470 191 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 RMST_7.1-201ENST00000621935 268 ntBASIC3.15□□□□□ -1.91
PCDH17O14917 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH17O14917 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH17O14917 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH17O14917 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDH17O14917 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PCDH17O14917 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PCDH17O14917 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
PCDH17O14917 AC010889.1-201ENST00000566193 2666 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 SNORD116-11-201ENST00000383882 92 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AL445529.1-201ENST00000398713 389 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 Z99755.1-201ENST00000414048 380 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AL117339.3-201ENST00000418733 162 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 HMGB1P18-201ENST00000438801 619 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AC107399.1-201ENST00000451226 265 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 MTND1P11-201ENST00000456661 876 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AMD1P1-201ENST00000457220 922 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AC107626.1-201ENST00000471084 183 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RPS26P21-201ENST00000475397 348 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 MRPL42P6-201ENST00000486397 371 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RPL23AP49-201ENST00000492925 468 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RNU6-377P-201ENST00000515965 102 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RNU6-581P-201ENST00000516214 105 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 SNORA43.2-201ENST00000516652 128 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RNU6-566P-201ENST00000516790 107 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RNA5SP454-201ENST00000517231 127 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH17O14917 AC007151.1-201ENST00000572774 483 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 MIR4790-201ENST00000577799 79 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH17O14917 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 AC104237.2-201ENST00000612456 443 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 SCARNA15.3-201ENST00000626315 122 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 SCARNA4.1-201ENST00000628597 123 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 MIR3529-201ENST00000637713 78 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 U4.7-201ENST00000638126 106 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 ZNF519P1-201ENST00000449011 1626 ntBASIC3.14□□□□□ -1.91
PCDH17O14917 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH17O14917 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH17O14917 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
PCDH17O14917 RNU6-858P-201ENST00000362436 107 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 RNU6-942P-201ENST00000363002 107 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 RNU6-19P-201ENST00000384718 107 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 SNORD73A-201ENST00000386062 65 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 SNORA48.5-201ENST00000391143 135 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH17O14917 AL645568.3-201ENST00000433683 316 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH17O14917 MTND1P17-201ENST00000448961 204 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC130509.1-201ENST00000464158 433 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 RPS27P26-201ENST00000494583 239 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 RNU5F-8P-201ENST00000515941 111 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 ACA59.2-201ENST00000517061 156 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDH17O14917 AC105029.1-201ENST00000520250 669 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC104576.1-201ENST00000524225 88 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH17O14917 AC009163.5-201ENST00000575421 637 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 MIR5004-201ENST00000579078 107 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH17O14917 ELOCP5-201ENST00000604924 333 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH17O14917 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH17O14917 AC011890.2-201ENST00000613393 294 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
PCDH17O14917 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH17O14917 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDH17O14917 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH17O14917 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms