Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX1O00570 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX1O00570 RNU6-858P-201ENST00000362436 107 ntBASIC4.37□□□□□ -1.71
SOX1O00570 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX1O00570 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SOX1O00570 RNY1P5-201ENST00000383890 115 ntBASIC4.37□□□□□ -1.71
SOX1O00570 SNORA48.5-201ENST00000391143 135 ntBASIC4.37□□□□□ -1.71
SOX1O00570 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX1O00570 AC011742.1-201ENST00000431448 434 ntBASIC4.37□□□□□ -1.71
SOX1O00570 SNRPEP9-201ENST00000436794 238 ntBASIC4.37□□□□□ -1.71
SOX1O00570 AC006011.1-201ENST00000442758 349 ntBASIC4.37□□□□□ -1.71
SOX1O00570 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX1O00570 RPS29P19-201ENST00000479709 171 ntBASIC4.37□□□□□ -1.71
SOX1O00570 RPL23AP49-201ENST00000492925 468 ntBASIC4.37□□□□□ -1.71
SOX1O00570 Y_RNA.662-201ENST00000516028 97 ntBASIC4.37□□□□□ -1.71
SOX1O00570 SNORA31.8-201ENST00000516327 108 ntBASIC4.37□□□□□ -1.71
SOX1O00570 SNORA43.2-201ENST00000516652 128 ntBASIC4.37□□□□□ -1.71
SOX1O00570 AC136601.2-201ENST00000604356 474 ntBASIC4.37□□□□□ -1.71
SOX1O00570 AL160290.3-201ENST00000604869 165 ntBASIC4.37□□□□□ -1.71
SOX1O00570 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX1O00570 AC021753.1-201ENST00000635724 168 ntBASIC4.37□□□□□ -1.71
SOX1O00570 AC241585.2-209ENST00000638217 143 ntBASIC4.37□□□□□ -1.71
SOX1O00570 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SOX1O00570 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SOX1O00570 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX1O00570 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX1O00570 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX1O00570 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SOX1O00570 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX1O00570 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX1O00570 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 AL353743.1-202ENST00000431724 1695 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
SOX1O00570 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 Y_RNA.170-201ENST00000363746 110 ntBASIC4.36□□□□□ -1.71
SOX1O00570 Y_RNA.286-201ENST00000364813 102 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RNU6-47P-201ENST00000383866 107 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RNU6-1181P-201ENST00000384191 106 ntBASIC4.36□□□□□ -1.71
SOX1O00570 MIR613-201ENST00000385248 95 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RNA5SP213-201ENST00000391031 106 ntBASIC4.36□□□□□ -1.71
SOX1O00570 SNORD12B-201ENST00000410433 91 ntBASIC4.36□□□□□ -1.71
SOX1O00570 EIF4HP2-201ENST00000424380 563 ntBASIC4.36□□□□□ -1.71
SOX1O00570 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX1O00570 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.36□□□□□ -1.71
SOX1O00570 snoU13.4-201ENST00000458916 104 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RPL32P34-201ENST00000486380 400 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RPL30P1-201ENST00000488676 339 ntBASIC4.36□□□□□ -1.71
SOX1O00570 RNU6-1114P-201ENST00000516022 107 ntBASIC4.36□□□□□ -1.71
SOX1O00570 SNORD116-28-201ENST00000516123 91 ntBASIC4.36□□□□□ -1.71
SOX1O00570 SNORA70.16-201ENST00000516390 95 ntBASIC4.36□□□□□ -1.71
SOX1O00570 SCARNA14-201ENST00000516903 136 ntBASIC4.36□□□□□ -1.71
SOX1O00570 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX1O00570 MIR4282-201ENST00000583613 67 ntBASIC4.36□□□□□ -1.71
SOX1O00570 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.36□□□□□ -1.71
SOX1O00570 AC244505.7-201ENST00000599675 272 ntBASIC4.36□□□□□ -1.71
SOX1O00570 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX1O00570 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.36□□□□□ -1.71
SOX1O00570 U6.106-201ENST00000636360 105 ntBASIC4.36□□□□□ -1.71
SOX1O00570 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX1O00570 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SOX1O00570 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX1O00570 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX1O00570 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 AC090740.1-201ENST00000623193 2262 ntBASIC4.35□□□□□ -1.71
SOX1O00570 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SOX1O00570 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 RNU6-21P-201ENST00000384710 107 ntBASIC4.35□□□□□ -1.71
SOX1O00570 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
SOX1O00570 UBA52P6-201ENST00000399822 382 ntBASIC4.35□□□□□ -1.71
SOX1O00570 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 AL139095.1-201ENST00000404326 391 ntBASIC4.35□□□□□ -1.71
SOX1O00570 Y_RNA.590-201ENST00000410140 107 ntBASIC4.35□□□□□ -1.71
SOX1O00570 RNU4-30P-201ENST00000410245 143 ntBASIC4.35□□□□□ -1.71
SOX1O00570 RNU2-61P-201ENST00000411069 191 ntBASIC4.35□□□□□ -1.71
SOX1O00570 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX1O00570 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX1O00570 AL139247.1-201ENST00000422768 325 ntBASIC4.35□□□□□ -1.71
SOX1O00570 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX1O00570 AC009237.8-201ENST00000445492 379 ntBASIC4.35□□□□□ -1.71
SOX1O00570 AP000870.1-201ENST00000472927 406 ntBASIC4.35□□□□□ -1.71
SOX1O00570 Y_RNA.679-201ENST00000516416 91 ntBASIC4.35□□□□□ -1.71
SOX1O00570 IGKV2-38-201ENST00000517443 247 ntBASIC4.35□□□□□ -1.71
SOX1O00570 LINC00933-203ENST00000559812 219 ntBASIC4.35□□□□□ -1.71
SOX1O00570 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms