Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC008267.5-201ENST00000424928 265 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1AO00322 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK1AO00322 RPL23AP3-201ENST00000453844 468 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 snoU109.2-201ENST00000459316 135 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC006512.1-201ENST00000468816 291 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 RNU6-667P-201ENST00000517186 102 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC109329.1-201ENST00000518744 317 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1AO00322 AP004607.1-201ENST00000524456 203 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 OR5AL2P-201ENST00000532185 920 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1AO00322 NDUFA5P6-201ENST00000542110 379 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC135279.1-201ENST00000543493 504 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 IMMP1LP2-201ENST00000552954 492 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC090888.2-201ENST00000559765 1144 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 U6.42-201ENST00000618440 107 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC106754.1-201ENST00000562632 1513 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC073343.1-201ENST00000328239 651 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 Y_RNA.97-201ENST00000363094 102 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 RNU6-660P-201ENST00000364566 109 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 RNU6-1200P-201ENST00000384162 107 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 RNU6-843P-201ENST00000384454 104 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK1AO00322 AL158823.1-201ENST00000418441 478 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1AO00322 AL354941.1-201ENST00000438600 464 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC004854.1-201ENST00000440356 349 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 GDI2P2-201ENST00000445131 608 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AL606517.1-201ENST00000446914 387 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC104058.1-201ENST00000448028 297 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 MTND1P12-201ENST00000455231 147 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 HSPE1P23-201ENST00000509838 286 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 DUXAP5-201ENST00000529668 529 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AP000763.2-201ENST00000540641 163 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 HSBP1P1-201ENST00000555205 166 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 MTCYBP33-201ENST00000575007 1130 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AL139022.2-201ENST00000606934 443 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AC098614.4-201ENST00000607601 462 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1AO00322 AC022306.3-201ENST00000619930 550 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 AP002782.1-201ENST00000623107 614 ntBASIC1.45□□□□□ -2.18
UPK1AO00322 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
UPK1AO00322 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UPK1AO00322 HAUS6P2-201ENST00000433254 2404 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 MIR10A-201ENST00000385043 110 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 MTCO2P8-201ENST00000412213 658 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 AC137499.1-201ENST00000427602 88 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK1AO00322 AL627311.1-201ENST00000431514 115 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK1AO00322 AC119618.1-201ENST00000434191 222 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AC118469.1-201ENST00000442943 488 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UPK1AO00322 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK1AO00322 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 AMD1P1-201ENST00000457220 922 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 FO393415.2-201ENST00000480085 343 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AC112204.1-201ENST00000502591 103 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK1AO00322 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK1AO00322 ADI1P3-201ENST00000549509 470 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1AO00322 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 AL773524.1-201ENST00000614065 229 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.44□□□□□ -2.18
UPK1AO00322 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK1AO00322 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK1AO00322 RNU6-655P-201ENST00000362858 107 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 RNU6-487P-201ENST00000365430 104 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 SNORA75B-201ENST00000384053 137 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 RNU6-72P-201ENST00000384285 79 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 MIR29C-201ENST00000385231 88 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 RNU2-32P-201ENST00000411193 191 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AL008987.1-201ENST00000415528 237 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC245102.2-201ENST00000448956 180 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK1AO00322 SNORD13-201ENST00000459299 104 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 snoU109.1-201ENST00000459339 135 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 MTND3P3-201ENST00000505004 126 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms