Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 MTND5P17-201ENST00000418405 1603 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 U8.3-201ENST00000363321 132 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 SNORD115-7-201ENST00000365306 82 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 SNORD14D-201ENST00000384390 87 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNU11-3P-201ENST00000391111 133 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AL031577.2-201ENST00000404133 280 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNU6-607P-201ENST00000411283 108 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RPS3AP3-201ENST00000411933 242 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 HMGN2P3-201ENST00000433603 273 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 HMGN2P5-201ENST00000436882 273 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC007969.2-201ENST00000441891 191 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RPL39P29-201ENST00000447779 157 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC104806.1-201ENST00000508720 308 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNA5SP356-201ENST00000515972 94 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNA5SP24-201ENST00000516478 95 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNA5SP148-201ENST00000516527 94 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AP002453.2-201ENST00000533503 320 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC087883.1-201ENST00000551882 391 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 MIR3682-201ENST00000581338 84 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC073539.2-201ENST00000597113 165 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC078795.2-201ENST00000602835 1252 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 APOOP1-201ENST00000604695 592 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC091834.1-201ENST00000614543 472 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 MIR6817-201ENST00000615588 66 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC098657.3-201ENST00000620434 263 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AL391262.2-201ENST00000622466 494 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AC079248.2-201ENST00000623779 326 ntBASIC1.54□□□□□ -2.16
SMKR1H3BMG3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.54□□□□□ -2.16
SMKR1H3BMG3 RNU6-116P-201ENST00000384042 109 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RNU2-3P-201ENST00000410144 191 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 OR6C66P-201ENST00000414917 930 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AL591043.1-201ENST00000432461 424 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RPS15AP10-201ENST00000432472 382 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 FDX1P2-201ENST00000450769 375 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AL118520.1-201ENST00000450770 291 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RPL23AP49-201ENST00000492925 468 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RN7SL636P-201ENST00000497504 294 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 MTND1P22-201ENST00000510572 951 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 DUXAP5-201ENST00000529668 529 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 ZNF321P-202ENST00000550843 495 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.53□□□□□ -2.16
SMKR1H3BMG3 MIR4429-201ENST00000580105 73 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 MIR548AB-201ENST00000584917 84 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC091135.1-201ENST00000585943 307 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 BNIP3P25-201ENST00000596023 559 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 AC090578.1-201ENST00000604955 591 ntBASIC1.53□□□□□ -2.16
SMKR1H3BMG3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNU6-527P-201ENST00000363425 104 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNA5SP68-201ENST00000363885 119 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNY4P34-201ENST00000364779 95 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RN7SKP27-201ENST00000410684 333 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 CYCSP33-201ENST00000414485 327 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC063976.3-201ENST00000426849 329 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 CBX3P6-201ENST00000430257 527 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AL122001.1-201ENST00000457027 370 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNU7-125P-201ENST00000458760 62 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 BZW1P2-201ENST00000473537 826 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms