Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 RNU6-198P-201ENST00000384258 104 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 Y_RNA.473-201ENST00000384333 102 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 RNU6-790P-201ENST00000384479 105 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 MIR559-201ENST00000385188 96 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 RPS29P27-201ENST00000463711 170 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 AC008571.1-201ENST00000467232 300 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 AC132942.1-201ENST00000486753 483 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 ACA59.1-201ENST00000515966 143 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 RNA5SP384-201ENST00000516615 116 ntBASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 Y_RNA.445-201ENST00000384168 102 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC083863.1-201ENST00000438811 231 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC011816.1-201ENST00000441346 546 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 EEF1B2P7-201ENST00000451177 676 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AL445433.1-201ENST00000457507 257 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC090096.1-201ENST00000489168 390 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AP005902.1-201ENST00000521358 186 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 SNORA62.6-201ENST00000606322 83 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 MIR7702-201ENST00000621931 59 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 MAPK10-253ENST00000641010 4072 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC85CA6NKD9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 MTND4P27-201ENST00000450813 1354 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 MIR195-201ENST00000385194 87 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC243428.1-201ENST00000421099 264 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 EIF4EP2-201ENST00000422816 654 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC018865.2-201ENST00000423631 129 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 HMGN2P20-201ENST00000437531 273 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SMURF2P1-201ENST00000514992 481 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 RNU6-470P-201ENST00000515954 104 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 RNU6-612P-201ENST00000516909 102 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SNORD19.2-201ENST00000516978 73 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC010186.2-204ENST00000537668 439 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC092608.2-201ENST00000624427 218 ntBASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC85CA6NKD9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 MTND5P30-201ENST00000452896 1731 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.5-201ENST00000362334 102 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.252-201ENST00000364556 101 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 RNU6-55P-201ENST00000411092 107 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AC023141.4-201ENST00000412031 328 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 PMCHL1-202ENST00000423102 261 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 NIPA2P5-201ENST00000452282 464 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 snoU13.26-201ENST00000459452 105 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AC116655.1-201ENST00000508324 901 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 SCARNA16.2-201ENST00000516520 172 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 MIR3976-201ENST00000606807 139 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AC011890.2-201ENST00000613393 294 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 AL591424.2-201ENST00000617023 128 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 U4.6-201ENST00000621618 127 ntBASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms