Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MIR8063-201ENST00000621930 81 ntBASIC0.77□□□□□ -2.29
TRAV27A0A087WT01 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV27A0A087WT01 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV27A0A087WT01 AL079343.1-201ENST00000572358 1771 ntBASIC0.77□□□□□ -2.29
TRAV27A0A087WT01 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV27A0A087WT01 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 RNU6-1010P-201ENST00000362757 107 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 MIR1267-201ENST00000408723 78 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 PIGPP2-201ENST00000411569 458 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 CST2P1-201ENST00000425770 87 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL035666.1-201ENST00000446195 348 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 RPF2P2-201ENST00000504693 896 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC093259.1-201ENST00000509755 300 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC098483.2-201ENST00000603158 454 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL359821.1-201ENST00000605519 182 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL133445.2-201ENST00000611191 527 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 uc_338.15-201ENST00000615470 191 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AC112204.3-201ENST00000623822 332 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 AL391516.1-201ENST00000554380 2449 ntBASIC0.76□□□□□ -2.29
TRAV27A0A087WT01 FARSBP1-201ENST00000435808 1778 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNA5SP327-201ENST00000362494 101 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 Y_RNA.99-201ENST00000363138 105 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNU6-414P-201ENST00000363705 104 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNU6-289P-201ENST00000364093 107 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNU6-392P-201ENST00000364926 101 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 USP9YP18-201ENST00000425912 695 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 USP9YP17-201ENST00000444617 696 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 MED28P2-201ENST00000475771 317 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AP001025.1-201ENST00000486139 332 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 RNU6-991P-201ENST00000516168 107 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AC025678.1-201ENST00000567861 338 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AP005136.1-201ENST00000579765 429 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 NIFKP6-201ENST00000598115 845 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AL355472.4-201ENST00000610233 626 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 AL078604.3-201ENST00000615580 211 ntBASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV27A0A087WT01 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 RNA5SP493-201ENST00000364115 91 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 SNORD1A-201ENST00000364968 72 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 RNU6-1080P-201ENST00000383982 107 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 MTCO3P5-201ENST00000433620 714 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC005094.1-201ENST00000440420 368 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC027119.1-201ENST00000440877 241 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AL078601.1-201ENST00000444542 271 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC087477.1-201ENST00000465747 340 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 RPL30P1-201ENST00000488676 339 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC019176.1-201ENST00000518519 225 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AP000907.2-201ENST00000530827 353 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 SUB1P4-201ENST00000566062 339 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AP001004.1-201ENST00000582468 324 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 VN1R83P-201ENST00000595685 445 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 BNIP3P30-201ENST00000601184 574 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 VN1R107P-201ENST00000601784 209 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AP000860.1-201ENST00000605250 559 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AL136313.1-201ENST00000624804 202 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AL133216.2-202ENST00000634512 349 ntBASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV27A0A087WT01 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-655P-201ENST00000362858 107 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-529P-201ENST00000363383 104 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-468P-201ENST00000384003 109 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-1222P-201ENST00000384615 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms