Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SNORA31.17-201ENST00000516953 127 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AP004247.1-201ENST00000531556 1289 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL136520.1-202ENST00000555494 763 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC025678.1-201ENST00000567861 338 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR3945-201ENST00000581853 98 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 BNIP3P30-201ENST00000601184 574 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL358072.1-201ENST00000604156 575 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL121890.5-201ENST00000620848 304 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC068880.4-201ENST00000623082 495 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC092656.1-203ENST00000624134 423 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR3529-201ENST00000637713 78 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 ZNF209P-201ENST00000593450 2304 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC092125.1-201ENST00000562568 1995 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-655P-201ENST00000362858 107 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-529P-201ENST00000363383 104 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-271P-201ENST00000363858 105 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR301A-201ENST00000385261 86 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCO1P17-201ENST00000411522 491 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC083875.1-201ENST00000419509 405 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 CST2P1-201ENST00000425770 87 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 MTND5P25-201ENST00000430499 799 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 FDX1P2-201ENST00000450769 375 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC012308.1-201ENST00000451232 178 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AL161670.1-201ENST00000554348 137 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC005668.1-201ENST00000571142 476 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR3660-201ENST00000584845 100 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC006270.3-201ENST00000605967 1036 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC097468.3-201ENST00000607956 456 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AC093648.1-201ENST00000623546 606 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 AP003485.1-201ENST00000625093 753 ntBASIC1□□□□□ -2.25
TMEM56-RWDD3S4R434 Y_RNA.99-201ENST00000363138 105 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-843P-201ENST00000384454 104 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-817P-201ENST00000391083 104 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR1284-201ENST00000408337 120 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 UBE2V1P10-201ENST00000414685 269 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC016831.2-201ENST00000417179 352 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 USP9YP18-201ENST00000425912 695 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 MTCO1P44-201ENST00000441935 243 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL035666.1-201ENST00000446195 348 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 ZNF886P-201ENST00000450781 723 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 DUXAP8-207ENST00000456786 622 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC093259.1-201ENST00000509755 300 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-1028P-201ENST00000517164 93 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RN7SKP256-201ENST00000517201 314 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AP003355.1-201ENST00000518956 587 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 MTND1P36-201ENST00000522384 936 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RPS3AP4-201ENST00000555161 764 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC025811.1-201ENST00000604312 472 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC007363.1-201ENST00000604736 620 ntBASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.99□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-23P-201ENST00000363283 107 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 SNORA62.1-201ENST00000364287 154 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 SNORA40.2-201ENST00000390847 128 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-278P-201ENST00000390945 109 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 MTND4P3-201ENST00000417829 541 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 USP9YP21-201ENST00000420603 432 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC010095.1-201ENST00000443543 144 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC018630.3-201ENST00000542637 96 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 AL158163.2-201ENST00000619110 700 ntBASIC0.98□□□□□ -2.25
TMEM56-RWDD3S4R434 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms