| CHCHD2 | Q9Y6H1 | AC024589.1-201 | ENST00000512207 | 263 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | LINC02353-201 | ENST00000515181 | 849 nt | TSL 1 (best) BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC104248.1-202 | ENST00000524134 | 486 nt | TSL 5 BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL133153.1-201 | ENST00000557756 | 303 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MIR3912-201 | ENST00000577566 | 105 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC012593.1-213 | ENST00000587255 | 510 nt | TSL 5 BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL133445.2-201 | ENST00000611191 | 527 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | DLEU2_6.2-201 | ENST00000620994 | 136 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC091965.5-201 | ENST00000624785 | 342 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | OR4G1P-203 | ENST00000641984 | 1631 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | ZNF680P1-201 | ENST00000436625 | 1469 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | CFAP97-201 | ENST00000296775 | 903 nt | TSL 5 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | C8orf59-201 | ENST00000321777 | 325 nt | TSL 1 (best) BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SNORD114-22-201 | ENST00000365423 | 72 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL359634.1-202 | ENST00000404721 | 284 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | USP9YP35-201 | ENST00000435696 | 412 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MTCYBP42-201 | ENST00000444653 | 1130 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL357793.2-201 | ENST00000447056 | 850 nt | TSL 3 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | PRELID3BP1-201 | ENST00000457142 | 540 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC132942.1-201 | ENST00000486753 | 483 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | HYDIN2-201 | ENST00000493714 | 554 nt | TSL 4 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | ATP5EP1-201 | ENST00000510257 | 156 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-150P-201 | ENST00000516237 | 95 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RN7SKP265-201 | ENST00000516448 | 223 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SNORA31.16-201 | ENST00000516773 | 139 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC026991.1-201 | ENST00000520815 | 463 nt | TSL 3 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC005832.3-201 | ENST00000537929 | 631 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC019288.1-201 | ENST00000557918 | 224 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC023906.2-201 | ENST00000558343 | 462 nt | TSL 3 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC136619.2-201 | ENST00000563361 | 631 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC093249.1-201 | ENST00000567049 | 203 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC060771.1-201 | ENST00000582031 | 164 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | BNIP3P8-201 | ENST00000597863 | 560 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC073410.2-201 | ENST00000603240 | 332 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC123912.5-201 | ENST00000605470 | 343 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL022345.1-201 | ENST00000607292 | 135 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL359740.1-201 | ENST00000624340 | 592 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | PRPSAP2-229 | ENST00000628609 | 192 nt | TSL 5 BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC099654.9-201 | ENST00000637055 | 678 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | KTN1-205 | ENST00000395314 | 4618 nt | APPRIS P4 TSL 1 (best) BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | CYSLTR1-203 | ENST00000614798 | 2681 nt | APPRIS P1 TSL 1 (best) BASIC | 0.88 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | Y_RNA.191-201 | ENST00000363972 | 113 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MIR532-201 | ENST00000385025 | 91 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU1-78P-201 | ENST00000391248 | 165 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU2-32P-201 | ENST00000411193 | 191 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC138623.1-201 | ENST00000418060 | 216 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL022400.1-201 | ENST00000423946 | 935 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL589986.2-201 | ENST00000429352 | 397 nt | TSL 2 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL139397.1-201 | ENST00000430456 | 644 nt | TSL 2 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | LINC00446-202 | ENST00000438327 | 357 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RPS27P1-201 | ENST00000450552 | 247 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SRP72-202 | ENST00000504757 | 745 nt | TSL 2 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | CTD-2350J17.1-202 | ENST00000510456 | 360 nt | TSL 2 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | PTP4A1P4-201 | ENST00000512479 | 322 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC008837.2-201 | ENST00000513076 | 418 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC027338.1-201 | ENST00000514840 | 825 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SNORA31.3-201 | ENST00000516029 | 96 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-113P-201 | ENST00000516653 | 101 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-334P-201 | ENST00000517072 | 102 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC021451.1-201 | ENST00000523498 | 1129 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | LINC00301-204 | ENST00000532591 | 470 nt | TSL 2 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC068205.1-204 | ENST00000532989 | 481 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RPL21P5-201 | ENST00000554662 | 472 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC069061.2-202 | ENST00000580280 | 357 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SOX2-OT-224 | ENST00000595313 | 716 nt | TSL 5 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC010900.2-201 | ENST00000604508 | 210 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC090970.3-201 | ENST00000612566 | 866 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC023158.2-201 | ENST00000614876 | 543 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AP000676.3-201 | ENST00000623299 | 569 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | CEP290-201 | ENST00000309041 | 7616 nt | APPRIS ALT1 TSL 5 BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 0.87 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RGS13-204 | ENST00000543215 | 1518 nt | APPRIS P1 TSL 1 (best) BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | CBX3P1-201 | ENST00000325243 | 554 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | OR5AK2-201 | ENST00000326855 | 996 nt | APPRIS P1 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | SNORA25.8-201 | ENST00000364831 | 128 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MTCO1P56-201 | ENST00000401674 | 224 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | MIR1287-201 | ENST00000408492 | 90 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU2-36P-201 | ENST00000410361 | 191 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC013269.3-201 | ENST00000450486 | 444 nt | TSL 3 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC104629.1-201 | ENST00000494226 | 508 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | LAMTOR3P2-201 | ENST00000504479 | 232 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | AC008869.1-201 | ENST00000510938 | 442 nt | TSL 2 BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 0.86 | □□□□□ -2.27 | | |
| CHCHD2 | Q9Y6H1 | RNU6-143P-201 | ENST00000516942 | 93 nt | BASIC | 0.86 | □□□□□ -2.27 | | |