Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-953P-201ENST00000459154 107 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RPL21P93-201ENST00000480465 489 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 LRRC34P2-201ENST00000514850 553 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 SNORA31.3-201ENST00000516029 96 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-677P-201ENST00000516914 101 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RNA5SP503-201ENST00000517047 117 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 MIR3605-201ENST00000583214 100 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.06□□□□□ -1.92
PCDHAC2Q9Y5I4 MTND4P35-201ENST00000604257 1375 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-550P-201ENST00000391057 101 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU4-53P-201ENST00000410828 140 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RNA5SP111-201ENST00000411386 101 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC092573.2-201ENST00000434546 243 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC011816.1-201ENST00000441346 546 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AL590639.1-201ENST00000456484 337 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 snoU13.26-201ENST00000459452 105 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.701-201ENST00000516812 110 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC011712.1-201ENST00000588959 234 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AC022432.1-201ENST00000595739 310 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 BNIP3P25-201ENST00000596023 559 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AP001836.1-201ENST00000604675 523 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 AL670379.4-201ENST00000605279 254 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 MIR7843-201ENST00000622274 79 ntBASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHAC2Q9Y5I4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU4-73P-201ENST00000363164 141 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-190P-201ENST00000384154 102 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-831P-201ENST00000384548 107 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 SNORD37.1-201ENST00000390968 65 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU2-29P-201ENST00000410423 189 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 MRPL50P4-201ENST00000446432 475 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RPL21P99-201ENST00000480369 423 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC104806.1-201ENST00000508720 308 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 FGF7P4-201ENST00000509595 295 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 MTND3P22-201ENST00000510932 243 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-123P-201ENST00000516163 102 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 RNU6-277P-201ENST00000516272 106 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 BTF3P12-201ENST00000519620 469 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC022690.1-201ENST00000526681 550 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC093027.1-201ENST00000546698 429 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC078795.3-201ENST00000602913 472 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL132765.2-201ENST00000610812 351 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL365204.3-201ENST00000612448 685 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC130324.3-201ENST00000614165 542 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AL133216.2-202ENST00000634512 349 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 AC103710.2-202ENST00000641454 2853 ntBASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHAC2Q9Y5I4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms