Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 CECR9-201ENST00000453421 199 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 RNA5SP503-201ENST00000517047 117 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 SNORA70.22-201ENST00000517160 124 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 TRAV32-201ENST00000553993 340 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 MIR3664-201ENST00000579074 99 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 MIR4769-201ENST00000584126 77 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AC136443.5-201ENST00000603741 370 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AL355802.4-201ENST00000607635 548 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AL365434.2-201ENST00000607979 234 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AC130324.3-201ENST00000614165 542 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.24□□□□□ -2.37
AP4S1Q9Y587 FARSBP1-201ENST00000435808 1778 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 MTCO1P9-201ENST00000505577 1534 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 SEC63P2-201ENST00000503863 1939 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 RNA5SP493-201ENST00000364115 91 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 Y_RNA.255-201ENST00000364581 97 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 RNU4-12P-201ENST00000365233 139 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AL451054.2-201ENST00000420896 202 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC008267.5-201ENST00000424928 265 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 RPL7P43-201ENST00000478876 753 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 FABP5P5-201ENST00000515537 406 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 RNU6-1053P-201ENST00000515930 101 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 ARL2BPP5-201ENST00000523141 481 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AL590396.4-201ENST00000636779 956 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 AC092447.10-201ENST00000620607 1652 ntBASIC0.23□□□□□ -2.37
AP4S1Q9Y587 OR4G2P-201ENST00000328113 903 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 RNU6-1235P-201ENST00000384559 107 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 MIR548B-201ENST00000385247 97 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AL356776.1-201ENST00000406574 447 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC007435.1-201ENST00000421086 415 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 FO393414.1-201ENST00000428697 1184 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 MTND1P28-201ENST00000435623 950 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 HSPE1P9-201ENST00000440046 311 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 RNU6-498P-201ENST00000459468 107 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 RNU6-528P-201ENST00000516926 100 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 RNU6-703P-201ENST00000516946 107 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC093249.1-201ENST00000567049 203 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC022387.2-201ENST00000604050 448 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC242628.1-201ENST00000606810 391 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.22□□□□□ -2.37
AP4S1Q9Y587 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.22□□□□□ -2.37
AP4S1Q9Y587 AC106858.1-201ENST00000637497 429 ntBASIC0.22□□□□□ -2.37
AP4S1Q9Y587 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 Y_RNA.338-201ENST00000365320 114 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 RNU1-39P-201ENST00000383897 165 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 RNU6-658P-201ENST00000384606 106 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 Z86062.1-201ENST00000406773 777 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC005345.1-201ENST00000431868 217 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC234064.1-201ENST00000436312 247 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC098869.1-201ENST00000481627 292 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 MTATP6P3-201ENST00000581686 676 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 KATNBL1P5-201ENST00000605015 517 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC243829.6-201ENST00000612652 106 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 MIR6134-201ENST00000617606 109 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 AL159972.1-201ENST00000625150 448 ntBASIC0.21□□□□□ -2.38
AP4S1Q9Y587 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
AP4S1Q9Y587 MTND4P14-201ENST00000435799 1354 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 Y_RNA.124-201ENST00000363339 93 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 RNU6-1274P-201ENST00000384557 107 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 ISCA1P6-201ENST00000427740 390 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 MTCYBP43-201ENST00000513621 740 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms