Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.772-201ENST00000606692 102 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AC005046.1-201ENST00000608515 625 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AC006065.5-201ENST00000623427 349 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 MIR3651-201ENST00000630427 90 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AL049781.1-201ENST00000623195 3585 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 RNU6-227P-201ENST00000362865 103 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.143-201ENST00000363520 106 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 MIR34A-201ENST00000385130 110 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 AC025755.1-201ENST00000521306 278 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 AC100770.1-201ENST00000532310 322 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 AC005476.1-201ENST00000554427 397 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 RPL23AP78-201ENST00000599928 470 ntBASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTCBQ9Y3I0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.16-201ENST00000362421 102 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 RNU6-774P-201ENST00000363238 107 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 RNA5SP235-201ENST00000365411 114 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 MIR490-201ENST00000384865 128 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 MIR1298-201ENST00000408783 112 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 Z85995.1-201ENST00000415547 335 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 HMGB1P37-201ENST00000439613 609 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 PIGFP3-201ENST00000441918 722 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 AC022795.1-201ENST00000473808 480 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 RNU6-377P-201ENST00000515965 102 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 CASP1P1-201ENST00000526345 212 ntBASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RTCBQ9Y3I0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RTCBQ9Y3I0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
RTCBQ9Y3I0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 Z73965.1-201ENST00000623412 2297 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 RNU6-428P-201ENST00000362942 107 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 RNU6-662P-201ENST00000384253 104 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.464-201ENST00000384282 110 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.581-201ENST00000391017 97 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 AL445305.1-201ENST00000432577 575 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 SNORD105B-201ENST00000458770 79 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 RNA5SP290-201ENST00000517133 127 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 RN7SKP57-201ENST00000517248 293 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 MIR3921-201ENST00000577308 85 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 RNA5SP108-201ENST00000605921 117 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 AC127459.3-201ENST00000624328 466 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 AC004925.1-201ENST00000624256 2706 ntBASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RTCBQ9Y3I0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.83-201ENST00000363005 113 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 RNA5SP50-201ENST00000363731 107 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.541-201ENST00000384640 113 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 SNORA40C-201ENST00000391285 128 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.644-201ENST00000459006 113 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 RN7SL601P-201ENST00000471221 293 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 ANXA2P1-201ENST00000505539 926 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.674-201ENST00000516362 113 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 SCARNA24.2-201ENST00000516968 130 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 SNORA31.19-201ENST00000517079 126 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 AC090617.7-201ENST00000623952 126 ntBASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms