Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 MIR325-201ENST00000385260 98 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 RNU6-550P-201ENST00000391057 101 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 RNU2-68P-201ENST00000410878 191 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AL353729.1-201ENST00000425044 720 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 RPL7P5-201ENST00000471472 736 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AC079140.5-201ENST00000507882 310 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 RBBP4P6-201ENST00000508098 202 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 MIR3942-201ENST00000585264 109 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 POLR3GP2-201ENST00000588366 668 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 AL158032.1-201ENST00000605401 106 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.53□□□□□ -1.84
SCAF8Q9UPN6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SCAF8Q9UPN6 AL079305.1-201ENST00000623159 3008 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 Y_RNA.259-201ENST00000364619 101 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 RNU6-1013P-201ENST00000384180 107 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AL160275.3-201ENST00000423876 471 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC087499.2-201ENST00000432861 149 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC104058.1-201ENST00000448028 297 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC092798.1-201ENST00000458542 409 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SNORD109B-201ENST00000458961 67 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SNORD109A-201ENST00000459128 67 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 MTCO1P29-201ENST00000496868 288 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC104136.1-201ENST00000512969 394 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SNORA31.1-201ENST00000515993 133 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SNORA31.5-201ENST00000516190 133 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SNORA25.17-201ENST00000517184 124 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AL163153.1-201ENST00000554223 283 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 FRG2DP-202ENST00000566967 323 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 MIR4425-201ENST00000580572 84 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 MIR3941-201ENST00000582572 103 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 HSPE1P7-201ENST00000604681 321 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AL670379.4-201ENST00000605279 254 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 Z82243.1-201ENST00000609432 473 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 DUSP12P1-201ENST00000612874 516 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC243829.7-201ENST00000633081 225 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 AC121333.1-201ENST00000567488 2709 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 MTND5P27-201ENST00000428871 1720 ntBASIC3.52□□□□□ -1.85
SCAF8Q9UPN6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RNU6-82P-201ENST00000363970 107 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 Y_RNA.315-201ENST00000365117 102 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RNU6-395P-201ENST00000365662 106 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 MIR888-201ENST00000401186 77 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RNA5SP111-201ENST00000411386 101 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 MTND4P19-201ENST00000446659 478 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RN7SL20P-201ENST00000488827 297 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RNA5SP380-201ENST00000517190 98 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AP003122.3-201ENST00000526316 255 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC084851.1-201ENST00000529105 249 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC093249.1-201ENST00000567049 203 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AL355598.1-201ENST00000604169 202 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 AL512643.1-201ENST00000635735 524 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 Z99571.1-201ENST00000636677 394 ntBASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCAF8Q9UPN6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SCAF8Q9UPN6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCAF8Q9UPN6 RNU6-1252P-201ENST00000363054 104 ntBASIC3.5□□□□□ -1.85
SCAF8Q9UPN6 Y_RNA.132-201ENST00000363421 102 ntBASIC3.5□□□□□ -1.85
SCAF8Q9UPN6 Y_RNA.339-201ENST00000365325 102 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms