Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PACSIN3Q9UKS6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-338P-201ENST00000383888 105 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 MIR625-201ENST00000385047 85 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 RNU2-14P-201ENST00000411053 191 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-130P-201ENST00000411112 103 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 RPS15AP6-201ENST00000420703 385 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 TRBVB-201ENST00000477100 408 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AC022080.3-201ENST00000544433 482 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AC087499.8-201ENST00000578406 226 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 CPDP1-201ENST00000579660 283 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 MIR548AC-201ENST00000585049 88 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AC006023.2-201ENST00000609916 167 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AL512643.1-201ENST00000635735 524 ntBASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PACSIN3Q9UKS6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AL353746.1-201ENST00000566293 6881 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-212P-201ENST00000362642 104 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 SNORD27-201ENST00000363981 72 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNU4-50P-201ENST00000364361 141 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-76P-201ENST00000384060 104 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 U1.1-201ENST00000384101 164 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-33P-201ENST00000384793 107 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AL353621.1-201ENST00000418219 243 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 PIGPP3-201ENST00000425307 415 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AL592045.1-201ENST00000429867 352 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC092423.1-201ENST00000430165 186 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RN7SL442P-201ENST00000473804 320 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC022493.1-201ENST00000492984 337 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC109329.1-201ENST00000518744 317 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AMZ2P1-203ENST00000565833 850 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC004584.2-201ENST00000570407 410 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AC008739.3-201ENST00000603262 127 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 Z99571.1-201ENST00000636677 394 ntBASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PACSIN3Q9UKS6 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC005183.1-201ENST00000603687 1979 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-1317P-201ENST00000364582 104 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 U8.8-201ENST00000365399 135 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.462-201ENST00000384268 102 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.518-201ENST00000384552 113 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 MIR215-201ENST00000384858 110 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-882P-201ENST00000391025 103 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-837P-201ENST00000391056 108 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AL513475.1-201ENST00000406602 315 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AL139247.1-201ENST00000422768 325 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 HMGB1P27-201ENST00000431429 603 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 ANP32BP2-201ENST00000454525 545 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 SNRPGP5-201ENST00000456003 220 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 GMPSP1-201ENST00000514075 579 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC144568.1-201ENST00000520139 137 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms