Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC097468.3-201ENST00000607956 456 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU1-22P-201ENST00000363334 158 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNU5A-8P-201ENST00000364102 114 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.302-201ENST00000364997 102 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.465-201ENST00000384293 102 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC078974.1-201ENST00000411597 223 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 CYCSP33-201ENST00000414485 327 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC112198.4-201ENST00000515450 351 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNA5SP137-201ENST00000516833 135 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC136619.2-201ENST00000563361 631 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 BNIP3P25-201ENST00000596023 559 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 PART1_2.1-201ENST00000612397 250 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC024581.2-201ENST00000619986 252 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC010608.3-201ENST00000625048 527 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC099654.8-201ENST00000637757 681 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC091812.1-201ENST00000432235 1948 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNA5SP276-201ENST00000362580 94 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNU4-91P-201ENST00000364778 135 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 SNORD114-22-201ENST00000365423 72 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RNU6-298P-201ENST00000390888 96 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 HMGN2P39-201ENST00000398005 273 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 RN7SKP266-201ENST00000410232 287 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 MTCO2P23-201ENST00000425216 680 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 MTND1P28-201ENST00000435623 950 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC245102.2-201ENST00000448956 180 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC055855.1-201ENST00000489563 579 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 HMGB1P35-201ENST00000503360 598 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC116353.3-201ENST00000511215 249 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 MTND5P13-201ENST00000513046 1079 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.670-201ENST00000516255 105 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 MRPS36P5-201ENST00000551909 298 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 MTATP6P3-201ENST00000581686 676 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC174048.1-201ENST00000603389 144 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 SNRPGP17-201ENST00000603780 214 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL355598.1-201ENST00000604169 202 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC105129.3-201ENST00000605455 485 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC123912.5-201ENST00000605470 343 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC072039.2-201ENST00000608883 439 ntBASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC88CQ9P219 AC138393.1-203ENST00000327086 343 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU6-224P-201ENST00000384055 107 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RPL30P4-201ENST00000429309 333 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RPS6P15-201ENST00000431996 751 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 SNORA31.3-201ENST00000516029 96 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU6-1315P-201ENST00000517187 99 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC023538.1-201ENST00000534576 736 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 CR383656.8-201ENST00000549046 145 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 MIR3908-201ENST00000579798 126 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC024619.4-201ENST00000580924 316 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC009974.1-201ENST00000608881 455 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU6-203P-201ENST00000384038 104 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU6-658P-201ENST00000384606 106 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 RNU6-1000P-201ENST00000391066 106 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 USP9YP33-201ENST00000412220 421 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC138623.1-201ENST00000418060 216 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC006366.1-201ENST00000422002 759 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 USP9YP35-201ENST00000435696 412 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 snoU109.1-201ENST00000459339 135 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 FAM206BP-201ENST00000510179 541 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AC105185.1-201ENST00000518705 535 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.1□□□□□ -2.23
CCDC88CQ9P219 MIR4299-201ENST00000577899 72 ntBASIC1.1□□□□□ -2.23
CCDC88CQ9P219 BNIP3P31-201ENST00000604515 566 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms