Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORA4.3-201ENST00000365564 137 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU4-14P-201ENST00000410858 122 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 MTCO2P12-201ENST00000427426 682 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL591704.1-201ENST00000432574 275 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC244505.4-201ENST00000434905 287 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 SSXP5-201ENST00000443473 287 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 TRBV1-201ENST00000476502 284 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC097462.2-201ENST00000504623 481 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-273P-201ENST00000516937 96 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AP000889.2-201ENST00000532684 490 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AP000763.2-201ENST00000540641 163 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 POLR3GP2-201ENST00000588366 668 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL451007.1-201ENST00000595491 289 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL133255.1-201ENST00000606374 441 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 AC233263.6-201ENST00000631132 1963 ntBASIC3.16□□□□□ -1.9
NCKIPSDQ9NZQ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-254P-201ENST00000363377 107 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-884P-201ENST00000363889 107 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-393P-201ENST00000384475 107 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC063979.1-201ENST00000415539 377 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC245054.2-201ENST00000415639 319 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC117503.1-201ENST00000472241 394 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 HMGN1P10-201ENST00000474557 553 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AL049873.1-201ENST00000480540 376 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND5P5-201ENST00000503764 376 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 TBCAP3-201ENST00000512475 312 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AP003072.1-201ENST00000531740 145 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR3672-201ENST00000584290 82 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC073539.2-201ENST00000597113 165 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AL161629.2-201ENST00000615347 275 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.15□□□□□ -1.91
NCKIPSDQ9NZQ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORD113-7-201ENST00000363762 77 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-371P-201ENST00000364283 108 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR578-201ENST00000384828 96 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR888-201ENST00000401186 77 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RPLP0P7-201ENST00000416050 667 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RPS3AP52-201ENST00000435639 297 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AL360271.2-201ENST00000447710 161 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL26P9-201ENST00000457466 433 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU7-167P-201ENST00000459160 62 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL21P41-201ENST00000459863 264 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms