Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 CALM1P1-201ENST00000442082 433 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 GPM6BP3-201ENST00000442797 145 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 Z75741.1-201ENST00000446793 314 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 MTCO2P18-201ENST00000457151 658 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AL162395.1-201ENST00000457882 422 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC112771.1-201ENST00000463581 102 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC091133.4-201ENST00000511142 308 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RNU1-86P-201ENST00000516108 154 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RNU1-107P-201ENST00000516617 154 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AP003034.1-201ENST00000534621 422 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC105137.2-201ENST00000569073 466 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC073539.2-201ENST00000597113 165 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 ZNF680P1-201ENST00000436625 1469 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC000403.1-201ENST00000613696 3585 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 RNU6-529P-201ENST00000363383 104 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 RNU6-715P-201ENST00000365204 103 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 RNU4-52P-201ENST00000384209 138 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 RPS4XP8-201ENST00000402039 771 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 RNU2-3P-201ENST00000410144 191 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 MTATP6P26-201ENST00000445926 662 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 PSPHP1-201ENST00000450062 261 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC108078.1-201ENST00000508073 725 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 SNORA43.2-201ENST00000516652 128 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 CKS1BP7-201ENST00000522230 235 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC087241.2-201ENST00000535801 324 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC073410.2-201ENST00000603240 332 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC025449.1-201ENST00000603896 529 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AL121917.1-203ENST00000605534 577 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 YPEL5P2-201ENST00000605553 359 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 AC022418.1-201ENST00000624118 445 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 MTND4P14-201ENST00000435799 1354 ntBASIC2.49□□□□□ -2.01
CHCHD3Q9NX63 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 Y_RNA.333-201ENST00000365274 102 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 SNORA70.4-201ENST00000365509 134 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RNU6-622P-201ENST00000384272 103 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 SNORD116-20-201ENST00000384529 92 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 EIF4EP4-201ENST00000424916 578 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC000111.3-201ENST00000433478 193 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC016691.1-201ENST00000441321 413 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 MTND1P29-201ENST00000448112 647 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RPS3P1-201ENST00000456781 192 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RNU7-63P-201ENST00000459054 62 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 MTND3P25-201ENST00000509243 135 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AF213884.2-201ENST00000510417 903 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 SMURF2P1-201ENST00000514992 481 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RNU6-1178P-201ENST00000516674 107 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC109479.2-201ENST00000517842 174 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AP005902.1-201ENST00000521358 186 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 MTCO3P23-201ENST00000561363 289 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 MIR3611-201ENST00000584484 83 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC098614.4-201ENST00000607601 462 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AC008121.3-201ENST00000618726 433 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RMST_7.1-201ENST00000621935 268 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 Z69720.2-201ENST00000624755 279 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 AL359851.1-201ENST00000569460 4997 ntBASIC2.48□□□□□ -2.01
CHCHD3Q9NX63 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC096644.4-201ENST00000563417 2912 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 Y_RNA.159-201ENST00000363674 87 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 RNU5E-7P-201ENST00000365290 117 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 RNU6-393P-201ENST00000384475 107 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AL663109.1-201ENST00000411498 844 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 UBE2V1P10-201ENST00000414685 269 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 CYCSP48-201ENST00000417124 323 ntBASIC2.47□□□□□ -2.01
CHCHD3Q9NX63 AC138623.1-201ENST00000418060 216 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms