Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 SNURFL-201ENST00000309296 343 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RNA5SP305-201ENST00000362665 119 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 Y_RNA.120-201ENST00000363304 110 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RNU6-1082P-201ENST00000364574 107 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 SNORA2.3-201ENST00000383920 135 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RNU6-622P-201ENST00000384272 103 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AL354714.3-201ENST00000447284 493 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AC073850.1-201ENST00000449243 255 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AC012308.1-201ENST00000451232 178 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 BX284632.1-201ENST00000478218 541 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AC044860.2-201ENST00000561005 179 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AL162713.1-201ENST00000604480 262 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AC004832.5-201ENST00000608677 401 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 AC002543.1-201ENST00000299783 1954 ntBASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRDM9Q9NQV7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 RNU1-64P-201ENST00000365443 163 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SNORA20B-201ENST00000384220 132 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SNORA48.5-201ENST00000391143 135 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SNORA79-201ENST00000408376 140 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 NDUFS5P4-201ENST00000412983 318 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 RPL35AP21-201ENST00000437667 333 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AC103975.1-201ENST00000482506 483 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 RPL30P5-201ENST00000494923 336 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SNORA70.12-201ENST00000516084 153 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 RNU6-537P-201ENST00000517277 103 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SNRPGP15-201ENST00000600149 222 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 AC068205.3-201ENST00000636385 468 ntBASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRDM9Q9NQV7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 SNORD58C-201ENST00000365223 64 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 CYCSP48-201ENST00000417124 323 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC093162.1-201ENST00000419682 124 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC051619.2-201ENST00000559063 397 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC027176.1-201ENST00000560204 514 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 MIR378D2-201ENST00000580636 98 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC100827.5-201ENST00000615883 426 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 MIR7155-201ENST00000615925 56 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 SNORD98-201ENST00000636377 67 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 AC138915.1-201ENST00000565427 1685 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 ASNSP1-201ENST00000518311 1939 ntBASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PRDM9Q9NQV7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AC000123.3-201ENST00000624029 4975 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AP002088.1-201ENST00000382740 395 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 MIR325-201ENST00000385260 98 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AC099548.1-201ENST00000421443 426 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms