Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CDCA3Q99618 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.59□□□□□ -2
CDCA3Q99618 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -2
CDCA3Q99618 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDCA3Q99618 SNORD114-1-201ENST00000362705 72 ntBASIC2.58□□□□□ -2
CDCA3Q99618 RNU6-1085P-201ENST00000363576 107 ntBASIC2.58□□□□□ -2
CDCA3Q99618 Y_RNA.372-201ENST00000365599 102 ntBASIC2.58□□□□□ -2
CDCA3Q99618 RNU6-1179P-201ENST00000384667 107 ntBASIC2.58□□□□□ -2
CDCA3Q99618 RNU6-903P-201ENST00000391270 109 ntBASIC2.58□□□□□ -2
CDCA3Q99618 SNORA40C-201ENST00000391285 128 ntBASIC2.58□□□□□ -2
CDCA3Q99618 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.58□□□□□ -2
CDCA3Q99618 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDCA3Q99618 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 AL591806.2-201ENST00000433122 173 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AC096638.1-201ENST00000444678 216 ntBASIC2.58□□□□□ -2
CDCA3Q99618 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDCA3Q99618 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
CDCA3Q99618 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
CDCA3Q99618 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 AC112206.3-201ENST00000514578 389 ntBASIC2.58□□□□□ -2
CDCA3Q99618 RNU6-1178P-201ENST00000516674 107 ntBASIC2.58□□□□□ -2
CDCA3Q99618 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AP005435.4-201ENST00000529514 284 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AC104383.1-201ENST00000530297 370 ntBASIC2.58□□□□□ -2
CDCA3Q99618 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 AC021739.1-201ENST00000559631 174 ntBASIC2.58□□□□□ -2
CDCA3Q99618 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
CDCA3Q99618 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.58□□□□□ -2
CDCA3Q99618 AC008739.2-201ENST00000597006 317 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 AP000787.2-201ENST00000604432 568 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AP001330.5-201ENST00000607176 411 ntBASIC2.58□□□□□ -2
CDCA3Q99618 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
CDCA3Q99618 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.58□□□□□ -2
CDCA3Q99618 MIR3199-2-201ENST00000636243 86 ntBASIC2.58□□□□□ -2
CDCA3Q99618 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CDCA3Q99618 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
CDCA3Q99618 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDCA3Q99618 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CDCA3Q99618 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CDCA3Q99618 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDCA3Q99618 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA3Q99618 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDCA3Q99618 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA3Q99618 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA3Q99618 SNORD3E-201ENST00000362899 217 ntBASIC2.57□□□□□ -2
CDCA3Q99618 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
CDCA3Q99618 Z98749.2-208ENST00000381646 500 ntBASIC2.57□□□□□ -2
CDCA3Q99618 RNU6-166P-201ENST00000384371 107 ntBASIC2.57□□□□□ -2
CDCA3Q99618 Y_RNA.516-201ENST00000384541 124 ntBASIC2.57□□□□□ -2
CDCA3Q99618 RNU6-780P-201ENST00000391030 104 ntBASIC2.57□□□□□ -2
CDCA3Q99618 BTF3P7-201ENST00000407097 488 ntBASIC2.57□□□□□ -2
CDCA3Q99618 MIR1289-2-201ENST00000408360 111 ntBASIC2.57□□□□□ -2
CDCA3Q99618 RNU2-29P-201ENST00000410423 189 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 TIMM9P3-201ENST00000428659 274 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.57□□□□□ -2
CDCA3Q99618 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
CDCA3Q99618 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC098831.1-201ENST00000440661 216 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AL078601.1-201ENST00000444542 271 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 CACYBPP2-201ENST00000453625 678 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AL583843.1-201ENST00000456070 346 ntBASIC2.57□□□□□ -2
CDCA3Q99618 GMFBP1-201ENST00000467831 427 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AL163973.1-201ENST00000484753 577 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.57□□□□□ -2
CDCA3Q99618 FAM92A1P2-202ENST00000504766 877 ntBASIC2.57□□□□□ -2
CDCA3Q99618 SEM1P1-201ENST00000506694 209 ntBASIC2.57□□□□□ -2
CDCA3Q99618 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 RNA5SP281-201ENST00000516504 135 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AC022634.1-201ENST00000520765 532 ntBASIC2.57□□□□□ -2
CDCA3Q99618 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.57□□□□□ -2
CDCA3Q99618 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AL512360.1-201ENST00000555346 234 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 MIR5692A1-201ENST00000580523 69 ntBASIC2.57□□□□□ -2
CDCA3Q99618 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.57□□□□□ -2
CDCA3Q99618 AL355877.2-201ENST00000603670 358 ntBASIC2.57□□□□□ -2
CDCA3Q99618 UCA1.1-201ENST00000620952 75 ntBASIC2.57□□□□□ -2
CDCA3Q99618 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.57□□□□□ -2
CDCA3Q99618 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.57□□□□□ -2
CDCA3Q99618 ADAM3A-203ENST00000461344 2157 ntBASIC2.57□□□□□ -2
CDCA3Q99618 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
CDCA3Q99618 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDCA3Q99618 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
CDCA3Q99618 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
CDCA3Q99618 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CDCA3Q99618 RNU6-552P-201ENST00000362869 119 ntBASIC2.56□□□□□ -2
CDCA3Q99618 RNU6-1322P-201ENST00000364309 107 ntBASIC2.56□□□□□ -2
CDCA3Q99618 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
CDCA3Q99618 RNU6-517P-201ENST00000384362 110 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms