Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MIR15A-201ENST00000607334 83 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 AC126118.1-201ENST00000607744 628 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 uc_338.15-201ENST00000615470 191 ntBASIC1.49□□□□□ -2.17
VAT1Q99536 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.49□□□□□ -2.17
VAT1Q99536 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VAT1Q99536 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VAT1Q99536 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
VAT1Q99536 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 RNU6-843P-201ENST00000384454 104 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 MIR1262-201ENST00000408276 93 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 RNU6-757P-201ENST00000410334 100 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 RNU2-62P-201ENST00000410868 191 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 OR9R1P-201ENST00000412200 877 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.48□□□□□ -2.17
VAT1Q99536 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.48□□□□□ -2.17
VAT1Q99536 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 EXOSC3P1-201ENST00000448649 500 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 FCF1P6-201ENST00000456841 595 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.48□□□□□ -2.17
VAT1Q99536 RNU6-1092P-201ENST00000516955 87 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.48□□□□□ -2.17
VAT1Q99536 AP000763.2-201ENST00000540641 163 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 GNAI2P1-201ENST00000541815 315 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.48□□□□□ -2.17
VAT1Q99536 BNIP3P30-201ENST00000601184 574 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.48□□□□□ -2.17
VAT1Q99536 AC018645.2-201ENST00000609151 472 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 uc_338.12-201ENST00000616344 181 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 AP000484.1-201ENST00000620067 1252 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 FRG1KP-201ENST00000623592 341 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VAT1Q99536 AC092104.1-201ENST00000497346 1441 ntBASIC1.48□□□□□ -2.17
VAT1Q99536 RNU6-942P-201ENST00000363002 107 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 U8.3-201ENST00000363321 132 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 RNU6-529P-201ENST00000363383 104 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 RNU6-946P-201ENST00000383878 107 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 RNU6-1274P-201ENST00000384557 107 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VAT1Q99536 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VAT1Q99536 RNU2-32P-201ENST00000411193 191 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC009518.2-201ENST00000418056 731 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 AL022400.1-201ENST00000423946 935 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 AL606517.1-201ENST00000446914 387 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 PTENP1-201ENST00000447117 1215 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 AL583843.1-201ENST00000456070 346 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 AP003392.2-201ENST00000527269 208 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC123904.2-201ENST00000548059 300 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.47□□□□□ -2.17
VAT1Q99536 MTCYBP33-201ENST00000575007 1130 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 MIR4713-201ENST00000582691 75 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 MIR4307-201ENST00000582802 84 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC174048.1-201ENST00000603389 144 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AL355816.2-201ENST00000610049 647 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 AC097478.2-201ENST00000610572 514 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.47□□□□□ -2.17
VAT1Q99536 AC092192.1-201ENST00000633154 1018 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 MIR3529-201ENST00000637713 78 ntBASIC1.47□□□□□ -2.17
VAT1Q99536 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VAT1Q99536 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VAT1Q99536 RNU6-395P-201ENST00000365662 106 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
VAT1Q99536 RNU6-611P-201ENST00000384276 104 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 MIR29C-201ENST00000385231 88 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 RNA5SP465-201ENST00000391195 109 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 UBE2V1P10-201ENST00000414685 269 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AL365338.1-201ENST00000422282 858 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.46□□□□□ -2.18
VAT1Q99536 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.46□□□□□ -2.18
VAT1Q99536 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 PRELID3BP1-201ENST00000457142 540 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 USP9YP25-201ENST00000457708 443 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 snoU109.2-201ENST00000459316 135 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC119751.4-201ENST00000507498 357 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC096745.1-201ENST00000509945 370 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 Y_RNA.689-201ENST00000516589 107 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.46□□□□□ -2.18
VAT1Q99536 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC103987.3-201ENST00000582071 292 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC021755.4-201ENST00000616620 456 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AL132822.1-201ENST00000617063 513 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 AC090517.3-201ENST00000625170 141 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 MTND4P16-201ENST00000466108 1367 ntBASIC1.46□□□□□ -2.18
VAT1Q99536 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
VAT1Q99536 RNY4P24-201ENST00000362735 96 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 RNU6-960P-201ENST00000364056 120 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms