Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPENQ96T58 RAP1BP2-201ENST00000478270 544 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 MED28P6-201ENST00000558776 231 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 AC021739.1-201ENST00000559631 174 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 AL158163.2-201ENST00000619110 700 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 RNU4-32P-201ENST00000363404 141 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
SPENQ96T58 AL449283.1-202ENST00000418249 604 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 USP9YP26-201ENST00000421008 661 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 USP9YP18-201ENST00000425912 695 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 USP9YP24-201ENST00000434374 697 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 USP9YP17-201ENST00000444617 696 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 TPMTP4-201ENST00000450749 678 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 BET1P1-201ENST00000482276 359 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 AC092474.3-201ENST00000603022 568 ntBASIC-0.04□□□□□ -2.42
SPENQ96T58 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
SPENQ96T58 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNU6-46P-201ENST00000383860 107 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNU6-338P-201ENST00000383888 105 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RPL30P7-201ENST00000479312 323 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RN7SKP12-201ENST00000516275 143 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNU4-54P-201ENST00000516428 129 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AP003034.1-201ENST00000534621 422 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC136619.2-201ENST00000563361 631 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC092125.1-201ENST00000562568 1995 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNU6-989P-201ENST00000362756 107 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNA5SP496-201ENST00000391240 109 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPENQ96T58 RNA5SP134-201ENST00000516492 96 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPENQ96T58 AC004923.2-201ENST00000529649 369 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC079791.1-201ENST00000605356 973 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC093913.1-201ENST00000614178 329 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 MIR6864-201ENST00000617935 70 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.05□□□□□ -2.42
SPENQ96T58 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 Z75746.1-201ENST00000440243 2080 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.05□□□□□ -2.42
SPENQ96T58 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.05□□□□□ -2.42
SPENQ96T58 AC099677.1-201ENST00000420575 175 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPENQ96T58 RN7SKP5-201ENST00000517045 272 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AC034114.1-201ENST00000520293 285 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 AL136520.1-202ENST00000555494 763 ntBASIC-0.05□□□□□ -2.42
SPENQ96T58 RNU4-48P-201ENST00000365559 182 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 MTND4LP21-201ENST00000415303 295 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 PNRC2P1-201ENST00000423940 420 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPENQ96T58 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.06□□□□□ -2.42
SPENQ96T58 AL162730.1-201ENST00000605734 292 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 AC016065.2-201ENST00000514530 444 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.06□□□□□ -2.42
SPENQ96T58 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SPENQ96T58 MIR1302-8-201ENST00000408342 128 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.06□□□□□ -2.42
SPENQ96T58 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
SPENQ96T58 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.06□□□□□ -2.42
SPENQ96T58 MTND2P17-201ENST00000550281 688 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 MIR378F-201ENST00000578143 78 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPENQ96T58 RPL30P11-203ENST00000598995 310 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 AC090517.2-201ENST00000614966 680 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 Z99571.1-201ENST00000636677 394 ntBASIC-0.06□□□□□ -2.42
SPENQ96T58 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.06□□□□□ -2.42
SPENQ96T58 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 MTCO1P44-201ENST00000441935 243 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 snoU13.21-201ENST00000459368 105 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 RPS3AP17-201ENST00000472594 777 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AC002350.1-201ENST00000490759 375 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AC105758.1-201ENST00000506038 399 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AC008562.1-201ENST00000521763 330 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 IGJP1-201ENST00000522682 475 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.07□□□□□ -2.42
SPENQ96T58 AL356432.3-201ENST00000568952 465 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AL391597.1-201ENST00000618707 694 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AC027309.3-201ENST00000623419 351 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 MIR200A-201ENST00000384875 90 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.07□□□□□ -2.42
SPENQ96T58 AC006512.1-201ENST00000468816 291 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 HMGB1P29-201ENST00000505659 499 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 RNU6-782P-201ENST00000516852 104 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 HMGN2P15-201ENST00000585707 270 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AL353149.1-201ENST00000610667 244 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.07□□□□□ -2.42
SPENQ96T58 MIR365A-201ENST00000362260 87 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 AC025465.3-201ENST00000510570 311 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 MTND2P26-201ENST00000528255 1029 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.07□□□□□ -2.42
SPENQ96T58 MIR6134-201ENST00000617606 109 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.07□□□□□ -2.42
SPENQ96T58 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.08□□□□□ -2.42
SPENQ96T58 SNORD89-201ENST00000390981 114 ntBASIC-0.08□□□□□ -2.42
SPENQ96T58 MIR942-201ENST00000401111 86 ntBASIC-0.08□□□□□ -2.42
SPENQ96T58 ELOCP11-201ENST00000436690 332 ntBASIC-0.08□□□□□ -2.42
SPENQ96T58 ELOCP16-201ENST00000444494 332 ntBASIC-0.08□□□□□ -2.42
SPENQ96T58 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms