Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MIR96-201ENST00000362288 78 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RNU6-188P-201ENST00000364207 107 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC104651.1-201ENST00000427559 735 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AL022238.1-201ENST00000442557 355 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RPS26P55-201ENST00000471178 356 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RNU2-53P-201ENST00000516257 147 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RNVU1-2-201ENST00000516326 135 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 Y_RNA.676-201ENST00000516393 96 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 SNORA31.17-201ENST00000516953 127 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC022616.8-201ENST00000533569 253 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC021171.1-201ENST00000603137 706 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 AC004908.3-201ENST00000610248 625 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 RNU6-898P-201ENST00000365627 104 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 UBE2V1P15-201ENST00000407776 448 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 RPL21P24-201ENST00000413752 448 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.93□□□□□ -2.26
LYSMD1Q96S90 AP003122.4-201ENST00000530980 758 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
LYSMD1Q96S90 AC026741.1-201ENST00000605892 482 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 AL355802.3-201ENST00000607571 545 ntBASIC0.93□□□□□ -2.26
LYSMD1Q96S90 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-288P-201ENST00000363690 104 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-707P-201ENST00000364647 95 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-1122P-201ENST00000384449 107 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-1274P-201ENST00000384557 107 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 BX664727.1-201ENST00000416024 466 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC138623.1-201ENST00000418060 216 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AL135790.2-201ENST00000437701 267 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 BTF3P15-201ENST00000455606 336 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 DUXAP8-207ENST00000456786 622 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RPL30P7-201ENST00000479312 323 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC026414.1-201ENST00000504046 698 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC034244.1-201ENST00000507687 207 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 HMGB1P28-201ENST00000507778 552 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-583P-201ENST00000516012 92 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
LYSMD1Q96S90 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.92□□□□□ -2.26
LYSMD1Q96S90 RNU2-42P-201ENST00000410697 113 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 FO393414.1-201ENST00000428697 1184 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 MTCO1P3-201ENST00000429327 192 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 MTND1P18-201ENST00000448191 573 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC010409.1-201ENST00000487382 476 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC008015.1-201ENST00000555505 465 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 LINC00557-201ENST00000563184 1279 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AC079148.1-201ENST00000565944 819 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 Z82243.1-201ENST00000609432 473 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 MIR6504-201ENST00000613520 61 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 HAUS6P2-201ENST00000433254 2404 ntBASIC0.91□□□□□ -2.26
LYSMD1Q96S90 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 RNU6-1010P-201ENST00000362757 107 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 Y_RNA.99-201ENST00000363138 105 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 RNU6-414P-201ENST00000363705 104 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 MIR186-201ENST00000384988 86 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 MIR1267-201ENST00000408723 78 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL035666.1-201ENST00000446195 348 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 MTND2P30-201ENST00000456663 382 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC087477.1-201ENST00000465747 340 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC023538.1-201ENST00000534576 736 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 SNRPGP1-201ENST00000553864 222 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC012414.6-201ENST00000568241 401 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC012065.4-201ENST00000602445 679 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms