Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC134026.1-201ENST00000623249 2239 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RNU4-10P-201ENST00000364383 140 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP173-201ENST00000364857 136 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 SNORA72.2-201ENST00000365028 127 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP397-201ENST00000391323 118 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 Z85995.1-201ENST00000415547 335 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AL354714.3-201ENST00000447284 493 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AL162591.2-201ENST00000449634 317 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 SNORA31.20-201ENST00000517111 133 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC122688.1-201ENST00000541494 223 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 uc_338.28-201ENST00000612082 187 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 AL359693.1-201ENST00000614959 2407 ntBASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
CNTNAP3BQ96NU0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP283-201ENST00000365604 119 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.572-201ENST00000384757 98 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 MIR616-201ENST00000385293 97 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 MIR548A3-201ENST00000385297 97 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP241-201ENST00000391326 114 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 Z92545.1-201ENST00000411782 234 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC073465.2-201ENST00000440938 498 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC015795.1-201ENST00000513669 327 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-58P-201ENST00000517143 103 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 RN7SL290P-201ENST00000578661 300 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC233702.9-201ENST00000581528 203 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC091979.2-201ENST00000607514 214 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC013791.1-201ENST00000616619 62 ntBASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNTNAP3BQ96NU0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CNTNAP3BQ96NU0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP3BQ96NU0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNTNAP3BQ96NU0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CNTNAP3BQ96NU0 MIR372-201ENST00000362225 67 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 RNU6-801P-201ENST00000364087 105 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 Y_RNA.393-201ENST00000383936 102 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 SNORA8.3-201ENST00000384679 139 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 RNU6-19P-201ENST00000384718 107 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 SNORA40C-201ENST00000391285 128 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 AL591034.1-201ENST00000407447 340 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 AC244098.2-201ENST00000422068 99 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 AL158147.1-201ENST00000443970 75 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 AL591623.2-201ENST00000449978 222 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 AL121914.1-201ENST00000450188 156 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 RPS17P2-201ENST00000461663 408 ntBASIC4.65□□□□□ -1.67
CNTNAP3BQ96NU0 RPL23AP94-201ENST00000512518 302 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms