Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC091805.2-201ENST00000603848 235 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC246785.4-201ENST00000605374 287 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC103810.6-201ENST00000606708 136 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AF250324.2-201ENST00000608299 610 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 MIR6766-201ENST00000622641 72 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC00477Q96M19 ZNF680P1-201ENST00000436625 1469 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU6-898P-201ENST00000365627 104 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU6-1029P-201ENST00000384109 107 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 SNORD116-4-201ENST00000384733 96 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 MIR483-201ENST00000385070 76 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU6-550P-201ENST00000391057 101 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU6-1158P-201ENST00000391167 107 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 SNORA40C-201ENST00000391285 128 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC00477Q96M19 MIR888-201ENST00000401186 77 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL669831.1-202ENST00000428504 417 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 WARS2P1-201ENST00000429678 537 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL591704.1-201ENST00000432574 275 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RPL23AP83-201ENST00000434984 473 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RPS15AP28-201ENST00000435088 386 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 GTF2IP13-201ENST00000438487 386 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 snoU109.2-201ENST00000459316 135 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC006512.1-201ENST00000468816 291 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC104435.1-201ENST00000483483 166 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC234781.5-201ENST00000508429 271 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 MTND3P5-201ENST00000512798 333 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU7-193P-201ENST00000516723 65 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNU6-677P-201ENST00000516914 101 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 RNA5SP291-201ENST00000517222 105 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AP003072.2-201ENST00000527756 676 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AK6P1-201ENST00000540219 478 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC024909.2-201ENST00000553035 286 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC078814.3-201ENST00000553036 491 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL157871.3-201ENST00000557231 293 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC106782.4-201ENST00000568264 210 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 MTATP6P3-201ENST00000581686 676 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AP001596.2-201ENST00000608410 312 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC013562.2-201ENST00000611632 603 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC138649.3-201ENST00000622154 254 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC024940.5-201ENST00000622889 474 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AC091932.3-201ENST00000624223 323 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 AL160394.1-201ENST00000624765 724 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 CTSLP2-204ENST00000629029 392 ntBASIC1.71□□□□□ -2.14
LINC00477Q96M19 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC00477Q96M19 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC073343.1-201ENST00000328239 651 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 RNU6-525P-201ENST00000363685 104 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 RNU6-108P-201ENST00000365558 107 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC00477Q96M19 RNU6-116P-201ENST00000384042 109 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 Y_RNA.582-201ENST00000391023 95 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 RNU6-1140P-201ENST00000410517 106 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 RNU2-16P-201ENST00000410712 136 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL663109.1-201ENST00000411498 844 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 CYCSP48-201ENST00000417124 323 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 HMGB1P27-201ENST00000431429 603 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC004383.1-201ENST00000438135 289 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL136380.1-201ENST00000447970 162 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 MTND1P18-201ENST00000448191 573 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL109933.2-201ENST00000452651 260 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC092001.1-201ENST00000453012 261 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC026801.1-201ENST00000497178 464 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC104806.1-201ENST00000508720 308 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 MTND3P25-201ENST00000509243 135 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC117522.1-201ENST00000509821 380 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AP003392.2-201ENST00000527269 208 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC006199.1-201ENST00000548728 219 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms