Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 BTF3P15-201ENST00000455606 336 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RPL31P58-201ENST00000469001 379 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 MTND2P14-201ENST00000482139 351 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC011005.2-201ENST00000487324 359 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC018868.1-201ENST00000491307 315 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC112204.1-201ENST00000502591 103 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 MTND4LP18-201ENST00000526864 291 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC011979.2-201ENST00000527568 352 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 ZNF519P3-201ENST00000557158 1032 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC008269.2-201ENST00000561915 1105 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC009063.1-201ENST00000563342 702 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC009097.3-201ENST00000563557 1018 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC091489.2-201ENST00000566263 604 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
PKNOX2Q96KN3 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 Y_RNA.510-201ENST00000384511 114 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RN7SKP32-201ENST00000410167 303 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RNU4-53P-201ENST00000410828 140 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AC003071.1-201ENST00000451219 789 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RPL21P99-201ENST00000480369 423 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RPS3AP22-201ENST00000488297 769 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 SNORA25.11-201ENST00000515935 105 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 RNU6-678P-201ENST00000516832 109 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 MRPS36P3-201ENST00000519284 130 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AP003461.1-201ENST00000528866 78 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AL157871.3-201ENST00000557231 293 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 SUB1P3-201ENST00000564581 315 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 MIR1273C-201ENST00000578669 77 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 AC018638.7-201ENST00000605836 1114 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 YWHAEP7-203ENST00000622054 312 ntBASIC1.9□□□□□ -2.11
PKNOX2Q96KN3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL445523.1-201ENST00000451184 1362 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RNU6-190P-201ENST00000384154 102 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RNU6-166P-201ENST00000384371 107 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AC092809.3-201ENST00000415453 231 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RPS15AP12-201ENST00000419498 388 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL008629.1-201ENST00000438615 184 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AP002770.2-201ENST00000543613 532 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 ELOCP32-201ENST00000548625 324 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AC008751.2-201ENST00000597885 980 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL670379.10-201ENST00000604330 253 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL670379.9-201ENST00000605428 253 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 MIR15A-201ENST00000607334 83 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 RNU6-91P-201ENST00000607774 107 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AC024933.1-201ENST00000608472 348 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL355816.2-201ENST00000610049 647 ntBASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
PKNOX2Q96KN3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 RNU6-501P-201ENST00000364072 100 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC112771.1-201ENST00000463581 102 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC006512.1-201ENST00000468816 291 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC007182.2-201ENST00000489251 402 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 MTND4P2-201ENST00000507767 1203 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AP003122.4-201ENST00000530980 758 ntBASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX2Q96KN3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms