Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU1-136P-201ENST00000384181 164 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 RNU4-37P-201ENST00000410214 84 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 RPL12P12-201ENST00000424633 501 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 KRT8P51-201ENST00000438938 274 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 AL353813.1-201ENST00000440700 253 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 FTLP8-201ENST00000446770 267 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 AC005363.1-201ENST00000530779 351 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 MIR4439-201ENST00000583746 80 ntBASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 RNU6-655P-201ENST00000362858 107 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 Y_RNA.340-201ENST00000365330 92 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 MIR493-201ENST00000385254 89 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 TOMM22P1-201ENST00000418578 312 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 BX276092.6-201ENST00000430476 250 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 BX276092.8-201ENST00000455722 250 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 AC068228.1-201ENST00000461723 211 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 MIR132-201ENST00000591554 101 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 AC024220.1-201ENST00000603675 484 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 AC096577.2-201ENST00000611455 153 ntBASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A3Q96HJ5 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AC000403.1-201ENST00000613696 3585 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RNU105B-201ENST00000364478 208 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RNA5SP433-201ENST00000364491 114 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RN7SKP81-201ENST00000365603 331 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MIR621-201ENST00000384919 96 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 U8.15-201ENST00000390947 134 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AC245096.1-201ENST00000413104 546 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AL513477.1-202ENST00000417061 214 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 REREP1Y-201ENST00000422655 198 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RN7SL547P-201ENST00000490793 290 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 HMGN1P7-201ENST00000491722 313 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RPS29P21-201ENST00000496272 170 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RN7SKP66-201ENST00000516681 231 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MIR4778-201ENST00000577635 80 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AC008507.3-201ENST00000585753 472 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 AL121839.2-201ENST00000565058 6943 ntBASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.27□□□□□ -1.57
MS4A3Q96HJ5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 RNU6-1201P-201ENST00000384227 107 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 RNU6-679P-201ENST00000391003 106 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 NXT1P1-201ENST00000458481 316 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 RN7SL352P-201ENST00000466002 277 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 RNA5SP340-201ENST00000517132 107 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 IGHVII-40-1-201ENST00000517316 58 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 AC079905.1-201ENST00000549280 475 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 TXNP4-201ENST00000575018 310 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 MIR4458-201ENST00000578872 75 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 AC012493.2-201ENST00000595083 291 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 AL359075.3-201ENST00000613288 217 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 FAM35BP-202ENST00000497389 3337 ntBASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MS4A3Q96HJ5 AL672167.1-203ENST00000641299 2975 ntBASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 AC009487.4-201ENST00000624969 3585 ntBASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MS4A3Q96HJ5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms