Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AP000907.4-201ENST00000604143 237 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC007621.1-201ENST00000604544 437 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC007938.3-201ENST00000604965 623 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC011155.2-201ENST00000623202 216 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC006020.1-201ENST00000420179 1854 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC138393.1-203ENST00000327086 343 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 SNORD115-7-201ENST00000365306 82 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 SNORA69-201ENST00000383895 132 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 RNU6-641P-201ENST00000384006 107 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 Y_RNA.453-201ENST00000384223 109 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AL356057.3-201ENST00000402607 340 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 MIR1277-201ENST00000408536 78 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 USP9YP27-201ENST00000418455 438 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AL109913.1-201ENST00000421173 514 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 MTND1P2-201ENST00000430604 821 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 AP001324.2-201ENST00000461163 319 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC006512.1-201ENST00000468816 291 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC092436.1-201ENST00000506450 503 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC009902.1-201ENST00000519351 183 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AP005435.4-201ENST00000529514 284 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC109635.3-201ENST00000529536 185 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 SNORA59B-202ENST00000578183 701 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC008536.2-201ENST00000607284 349 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 MIR15A-201ENST00000607334 83 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC002553.4-201ENST00000616896 331 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AL354950.2-201ENST00000617939 290 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
PDLIM5Q96HC4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM5Q96HC4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDLIM5Q96HC4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 Y_RNA.89-201ENST00000363031 102 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 SNORA62.1-201ENST00000364287 154 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU6-534P-201ENST00000364877 106 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 SNORA4.3-201ENST00000365564 137 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 MIR128-1-201ENST00000384921 82 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 SNORA40C-201ENST00000391285 128 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 USP9YP20-201ENST00000419224 558 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC012308.1-201ENST00000451232 178 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU7-182P-201ENST00000459009 62 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU6-261P-201ENST00000459506 102 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 GMFBP1-201ENST00000467831 427 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 RPL36AP48-201ENST00000485521 314 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC069439.1-201ENST00000494739 167 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC097462.2-201ENST00000504623 481 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU6-1281P-201ENST00000516223 105 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 RN7SKP219-201ENST00000516825 296 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 ACA59.2-201ENST00000517061 156 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 MTND1P35-201ENST00000526739 508 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 ADI1P3-201ENST00000549509 470 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC008521.1-201ENST00000587471 187 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 BNIP3P30-201ENST00000601184 574 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AL162413.1-201ENST00000603198 110 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC104458.1-201ENST00000608243 463 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms