Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 Z83843.1-201ENST00000604070 3685 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HPS3Q969F9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HPS3Q969F9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HPS3Q969F9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HPS3Q969F9 SNORD56.3-201ENST00000363507 71 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC016831.2-201ENST00000417179 352 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.57□□□□□ -1.84
HPS3Q969F9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.57□□□□□ -1.84
HPS3Q969F9 UBE2V1P4-201ENST00000425374 344 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.57□□□□□ -1.84
HPS3Q969F9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.57□□□□□ -1.84
HPS3Q969F9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS3Q969F9 HMGN2P10-201ENST00000448085 265 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC125238.1-201ENST00000448842 249 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.57□□□□□ -1.84
HPS3Q969F9 AC091179.1-201ENST00000461606 579 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC008526.1-201ENST00000509149 338 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 Y_RNA.691-201ENST00000516611 103 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 SNORA31.21-201ENST00000517180 77 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 RNA5SP454-201ENST00000517231 127 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AP004607.1-201ENST00000524456 203 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC021739.1-201ENST00000559631 174 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 MIR4790-201ENST00000577799 79 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AC073476.4-201ENST00000628409 72 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 AL133216.2-202ENST00000634512 349 ntBASIC3.57□□□□□ -1.84
HPS3Q969F9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS3Q969F9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HPS3Q969F9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.56□□□□□ -1.84
HPS3Q969F9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HPS3Q969F9 Y_RNA.184-201ENST00000363884 108 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 SNORA14A-201ENST00000364773 135 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS3Q969F9 U3.19-201ENST00000390893 196 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS3Q969F9 AC074085.1-201ENST00000413598 418 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 AC093151.1-201ENST00000427711 313 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 AC107399.1-201ENST00000451226 265 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 NIPA2P5-201ENST00000452282 464 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS3Q969F9 RN7SL807P-201ENST00000470923 297 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.56□□□□□ -1.84
HPS3Q969F9 FGF7P4-201ENST00000509595 295 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 RAB11AP2-201ENST00000545905 639 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 RPS3AP23-202ENST00000574601 686 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 AC123912.5-201ENST00000605470 343 ntBASIC3.56□□□□□ -1.84
HPS3Q969F9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS3Q969F9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HPS3Q969F9 RNA5SP383-201ENST00000362934 120 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 Y_RNA.135-201ENST00000363439 95 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 Y_RNA.529-201ENST00000384586 119 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 MIR518D-201ENST00000385014 87 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 SNORD56-201ENST00000413522 71 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AC245291.1-201ENST00000419501 328 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.55□□□□□ -1.84
HPS3Q969F9 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 MTND3P23-201ENST00000431980 347 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.55□□□□□ -1.84
HPS3Q969F9 RPS15AP5-201ENST00000436276 388 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 RPL23AP22-201ENST00000437556 453 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.55□□□□□ -1.84
HPS3Q969F9 AC092185.1-201ENST00000491371 97 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AC096745.1-201ENST00000509945 370 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AP005597.4-201ENST00000526762 229 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AC005000.2-201ENST00000605468 310 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS3Q969F9 AC009233.1-201ENST00000616477 371 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HPS3Q969F9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HPS3Q969F9 ZNF519P1-201ENST00000449011 1626 ntBASIC3.55□□□□□ -1.84
HPS3Q969F9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HPS3Q969F9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HPS3Q969F9 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 AL445529.1-201ENST00000398713 389 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AL031274.1-201ENST00000450334 232 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 RPL23AP45-201ENST00000476406 468 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS3Q969F9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.54□□□□□ -1.84
HPS3Q969F9 RNU6-377P-201ENST00000515965 102 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AC022634.1-201ENST00000520765 532 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 COPS8P3-201ENST00000526024 482 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.54□□□□□ -1.84
HPS3Q969F9 AL117336.2-201ENST00000602435 335 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms