Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC006600.1-201ENST00000572529 153 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF1Q92994 AC008962.1-201ENST00000605729 304 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF1Q92994 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
BRF1Q92994 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
BRF1Q92994 USP8P1-201ENST00000494673 3183 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF1Q92994 SNORA31-201ENST00000362607 130 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 RNA5SP189-201ENST00000364920 115 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 RNU1-64P-201ENST00000365443 163 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 DEFB109C-201ENST00000382575 264 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 DEFB109B-201ENST00000382656 264 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 Y_RNA.512-201ENST00000384518 102 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 MIR521-1-201ENST00000384902 87 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 SAR1AP2-201ENST00000392696 594 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.16□□□□□ -1.74
BRF1Q92994 RAB9AP3-201ENST00000412737 573 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC092047.1-201ENST00000424997 240 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
BRF1Q92994 AL078601.1-201ENST00000444542 271 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 RAB9AP1-201ENST00000449393 573 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRF1Q92994 MTCO3P8-201ENST00000453691 755 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 RPL30P10-201ENST00000488148 337 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF1Q92994 RNU1-95P-201ENST00000516357 160 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 RNU1-128P-201ENST00000516704 160 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC026333.2-201ENST00000542164 106 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC103996.1-201ENST00000555468 102 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.16□□□□□ -1.74
BRF1Q92994 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF1Q92994 SRGNP1-201ENST00000603392 451 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 AC005046.1-201ENST00000608515 625 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 HMGB1P24-202ENST00000615653 685 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF1Q92994 AC022149.2-201ENST00000621061 203 ntBASIC4.16□□□□□ -1.74
BRF1Q92994 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF1Q92994 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRF1Q92994 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
BRF1Q92994 RNU6-379P-201ENST00000363813 104 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 RN7SKP202-201ENST00000410439 330 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 RN7SKP58-201ENST00000411010 305 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 MTCO3P19-201ENST00000415864 321 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC007098.1-201ENST00000420122 367 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC098614.2-201ENST00000426040 255 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF1Q92994 FCF1P4-201ENST00000448326 183 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 RN7SL594P-201ENST00000470590 287 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF1Q92994 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF1Q92994 AC104619.4-201ENST00000510773 249 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF1Q92994 RNU2-27P-201ENST00000516185 142 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 RNU6-572P-201ENST00000516724 80 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 RNU1-45P-201ENST00000517191 141 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF1Q92994 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF1Q92994 AC005476.1-201ENST00000554427 397 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 HMGB1P14-201ENST00000557424 591 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF1Q92994 AC004805.2-201ENST00000605382 482 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC009318.2-201ENST00000610917 651 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AL442067.1-201ENST00000613261 223 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AC099506.2-201ENST00000623074 221 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 AP003355.3-201ENST00000623465 114 ntBASIC4.15□□□□□ -1.75
BRF1Q92994 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF1Q92994 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
BRF1Q92994 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF1Q92994 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRF1Q92994 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
BRF1Q92994 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
BRF1Q92994 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
BRF1Q92994 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.14□□□□□ -1.75
BRF1Q92994 SNORD50.1-201ENST00000362987 71 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 RNY3P11-201ENST00000364153 102 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 Y_RNA.214-201ENST00000364201 112 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 RNU4-50P-201ENST00000364361 141 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 Y_RNA.396-201ENST00000383949 103 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 SNORA5A-201ENST00000384111 134 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BRF1Q92994 RNU6-700P-201ENST00000391043 107 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 RPS29P13-201ENST00000402041 169 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC009310.1-201ENST00000414414 451 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 VDAC1P3-201ENST00000434069 851 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF1Q92994 RPS3AP12-201ENST00000443616 753 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 NDUFS5P3-201ENST00000450668 321 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 PCNPP5-201ENST00000452246 481 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 RN7SL542P-201ENST00000467147 294 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AK3P2-201ENST00000507976 429 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC026784.1-201ENST00000507986 352 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BRF1Q92994 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF1Q92994 RNU6-612P-201ENST00000516909 102 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms