Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AL035423.1-201ENST00000420331 213 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AL627311.1-201ENST00000431514 115 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC011816.1-201ENST00000441346 546 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 PCMTD1P1-201ENST00000455560 355 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 RN7SL442P-201ENST00000473804 320 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 SNORA67.7-201ENST00000516664 135 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 RNU6-307P-201ENST00000516743 106 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC039056.2-201ENST00000622261 511 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC4Q92889 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC4Q92889 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC4Q92889 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC4Q92889 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ERCC4Q92889 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC4Q92889 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC4Q92889 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC4Q92889 MTND5P27-201ENST00000428871 1720 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 Y_RNA.2-201ENST00000362330 96 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 RNU6-166P-201ENST00000384371 107 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 MIR548F4-201ENST00000408515 105 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 SNORD56-201ENST00000413522 71 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 YPEL5P1-201ENST00000419731 367 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.88□□□□□ -1.79
ERCC4Q92889 AL583843.1-201ENST00000456070 346 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 AC139453.3-201ENST00000493276 369 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 AC022493.2-201ENST00000506122 481 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.88□□□□□ -1.79
ERCC4Q92889 RNU6-120P-201ENST00000516077 103 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 RNA5SP291-201ENST00000517222 105 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.88□□□□□ -1.79
ERCC4Q92889 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC4Q92889 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC4Q92889 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC4Q92889 SUB1P3-201ENST00000564581 315 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC4Q92889 AL645944.1-201ENST00000603857 493 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 CR392039.5-201ENST00000623201 510 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 AL078596.1-201ENST00000624856 447 ntBASIC3.88□□□□□ -1.79
ERCC4Q92889 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
ERCC4Q92889 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC4Q92889 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC4Q92889 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC4Q92889 ZNF807-201ENST00000328088 1707 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AC002546.1-201ENST00000588041 2504 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC4Q92889 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC4Q92889 RNA5SP124-201ENST00000362739 110 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 Y_RNA.80-201ENST00000362996 102 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL359837.1-201ENST00000381357 287 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL356057.3-201ENST00000402607 340 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 RNU6-325P-201ENST00000411132 105 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 ATP5A1P2-201ENST00000412323 255 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC4Q92889 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.87□□□□□ -1.79
ERCC4Q92889 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.87□□□□□ -1.79
ERCC4Q92889 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC4Q92889 AP000907.1-201ENST00000428428 510 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL160004.2-201ENST00000432935 350 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 SNRPEP4-201ENST00000435815 279 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.87□□□□□ -1.79
ERCC4Q92889 GSTA11P-201ENST00000452866 669 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC4Q92889 AC091179.1-201ENST00000461606 579 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 RPS27P29-201ENST00000463110 252 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AC018437.1-201ENST00000492214 406 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 MTND4LP22-201ENST00000508209 276 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AC116655.1-201ENST00000508324 901 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC4Q92889 SNORA31.19-201ENST00000517079 126 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 RNA5SP165-201ENST00000517142 115 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL117187.1-201ENST00000555482 181 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.87□□□□□ -1.79
ERCC4Q92889 AC109446.1-201ENST00000566172 220 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC4Q92889 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ERCC4Q92889 BNIP3P16-201ENST00000589779 534 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL121772.2-201ENST00000614331 297 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 AL110115.1-201ENST00000614396 364 ntBASIC3.87□□□□□ -1.79
ERCC4Q92889 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
ERCC4Q92889 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-37P-201ENST00000362692 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-11P-201ENST00000364234 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-7-201ENST00000364784 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-8-201ENST00000365467 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-25P-201ENST00000383873 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-1-201ENST00000383898 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-48P-201ENST00000384161 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-36P-201ENST00000384172 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-4P-201ENST00000384205 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-5P-201ENST00000384238 107 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms