Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC090888.1-201ENST00000561335 1141 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 HMGN2P15-201ENST00000585707 270 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC119751.7-201ENST00000600494 245 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC012493.3-201ENST00000604494 112 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MIR6840-201ENST00000611937 71 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 CENPCP1-201ENST00000533085 2578 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL049641.1-201ENST00000441055 1948 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL596028.1-201ENST00000326971 197 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 RPS3AP3-201ENST00000411933 242 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 CYCSP46-201ENST00000423569 204 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 ZNF863P-201ENST00000426746 417 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 RPL7L1P10-201ENST00000427790 463 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC009961.2-201ENST00000435771 251 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL136380.1-201ENST00000447970 162 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC010631.1-201ENST00000474150 156 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 NRON-201ENST00000517270 370 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC022616.6-201ENST00000520479 119 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL157871.3-201ENST00000557231 293 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MIR3118-1-201ENST00000581787 76 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 BCRP9-201ENST00000605312 388 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 SNORA14A-201ENST00000364773 135 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 RPL23AP32-201ENST00000395315 459 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 MIR1302-8-201ENST00000408342 128 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 RNU6-1077P-201ENST00000410506 102 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 HMGN1P14-201ENST00000412459 517 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC010099.1-201ENST00000455434 375 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 TOMM22P6-201ENST00000465035 409 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 KLF3P2-201ENST00000465138 268 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 RPS15AP36-201ENST00000492022 382 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC022493.1-201ENST00000492984 337 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 RNU6-64P-201ENST00000517119 105 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 RNU6-1223P-201ENST00000517124 104 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 ANP32BP3-201ENST00000559213 706 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AL359999.1-201ENST00000604513 294 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC121247.2-201ENST00000604776 136 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC005332.10-201ENST00000612725 619 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AL390240.1-201ENST00000612950 384 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 uc_338.12-201ENST00000616344 181 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 FARSBP1-201ENST00000435808 1778 ntBASIC1.62□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.245-201ENST00000364493 95 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RNY4P34-201ENST00000364779 95 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 GPR143P-201ENST00000434155 205 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 BNIP3P2-201ENST00000441221 577 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 USP9YP29-201ENST00000445112 563 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AL592447.1-201ENST00000447592 540 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 MTND2P24-201ENST00000453434 806 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RNU6-420P-201ENST00000458780 107 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.689-201ENST00000516589 107 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AF038458.1-201ENST00000588406 262 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RSL24D1P11-201ENST00000591045 491 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 SEPT7P9-203ENST00000604116 343 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 TPTE2P4-201ENST00000258589 1605 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RNU5E-1-201ENST00000362477 120 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.327-201ENST00000365201 102 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 RNU6-198P-201ENST00000384258 104 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.608-201ENST00000410647 95 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 MTND1P28-201ENST00000435623 950 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms