Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MTCYBP2-201ENST00000407745 171 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 U3.37-201ENST00000408528 213 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RPL26P27-201ENST00000414397 437 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 HIGD1AP2-201ENST00000446367 280 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 SNORD105B-201ENST00000458770 79 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-911P-201ENST00000516523 104 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AC091144.1-201ENST00000519573 138 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MIR5701-3-201ENST00000578890 82 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MIR5188-201ENST00000583467 113 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MIR5701-1-201ENST00000585138 82 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AL158827.2-201ENST00000602494 330 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MIR5701-2-201ENST00000615634 82 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 AL691447.3-201ENST00000635020 330 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 SNORD9-201ENST00000362566 104 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-428P-201ENST00000362942 107 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 RNA5SP31-201ENST00000411144 127 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 MTCO3P19-201ENST00000415864 321 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 HMGN2P30-201ENST00000423237 256 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC108059.2-201ENST00000434626 151 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 MTCO3P8-201ENST00000453691 755 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC084357.1-201ENST00000473404 255 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 RPL30P10-201ENST00000488148 337 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 RNU2-58P-201ENST00000516403 183 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 Y_RNA.715-201ENST00000517082 110 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC131281.1-201ENST00000522984 164 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AP004607.1-201ENST00000524456 203 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC040926.1-201ENST00000530195 238 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC006600.1-201ENST00000572529 153 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC007179.3-201ENST00000604976 235 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC009318.2-201ENST00000610917 651 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AC138627.2-201ENST00000624202 601 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SH3RF2Q8TEC5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-78P-201ENST00000362897 107 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 HLFP1-201ENST00000402375 499 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 MTND3P9-201ENST00000429526 346 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 AC092423.1-201ENST00000430165 186 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 AC073910.1-201ENST00000445047 438 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 OSTCP8-201ENST00000445117 448 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RN7SKP210-201ENST00000459176 261 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 snoU109.2-201ENST00000459316 135 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 AC010655.3-201ENST00000478818 450 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RNU1-103P-201ENST00000516502 125 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 MIR3668-201ENST00000582138 75 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 AL672296.1-201ENST00000427780 2158 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
SH3RF2Q8TEC5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 Y_RNA.106-201ENST00000363189 100 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 RNU4-50P-201ENST00000364361 141 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 RNA5SP72-201ENST00000364442 117 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-784P-201ENST00000384330 106 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-505P-201ENST00000384427 107 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-658P-201ENST00000384606 106 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 MIR628-201ENST00000385229 95 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 SNORA69.1-201ENST00000390904 137 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 BTF3L4P2-201ENST00000392798 346 ntBASIC3.79□□□□□ -1.8
SH3RF2Q8TEC5 MIR888-201ENST00000401186 77 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms