Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 SMIM11P1-201ENST00000369586 178 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AL353621.1-201ENST00000418219 243 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC097463.2-201ENST00000421074 142 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC096920.1-201ENST00000423991 241 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 IFNA20P-201ENST00000436840 528 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 NEFMP1-201ENST00000443423 1006 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 RPL23AP35-201ENST00000451906 501 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 SNORD97-201ENST00000459187 142 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 BZW1P2-201ENST00000473537 826 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 MTND3P3-201ENST00000505004 126 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC119751.4-201ENST00000507498 357 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC116655.1-201ENST00000508324 901 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 RNU5A-4P-201ENST00000516588 111 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 RNU5B-3P-201ENST00000516601 115 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 OR5AL2P-201ENST00000532185 920 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 MTND4P33-201ENST00000556706 766 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 MTND1P8-201ENST00000571424 950 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC174048.1-201ENST00000603389 144 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 BNIP3P9-201ENST00000603714 553 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC144521.1-201ENST00000607148 956 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 RNU6-91P-201ENST00000607774 107 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC009974.1-201ENST00000608881 455 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 uc_338.12-201ENST00000616344 181 ntBASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
LMX1AQ8TE12 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AL391994.1-201ENST00000254724 282 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 SNORD113-6-201ENST00000363345 75 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 RNU5E-6P-201ENST00000365574 115 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 SNORA40C-201ENST00000391285 128 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 RNA5SP450-201ENST00000411206 102 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 PGBD4P6-201ENST00000421501 610 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 RAC1P6-201ENST00000423911 575 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AL353777.1-201ENST00000425552 326 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 NDUFA5P4-201ENST00000436704 385 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC092001.1-201ENST00000453012 261 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 RPL37P6-201ENST00000460682 294 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 TOMM22P6-201ENST00000465035 409 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 SNORA48.11-201ENST00000517015 89 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC023050.2-201ENST00000544968 387 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 ARL2BPP2-201ENST00000550907 489 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC012213.3-201ENST00000577199 777 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC010928.2-201ENST00000588017 287 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AC108747.1-201ENST00000609508 535 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 AL353770.2-201ENST00000620024 78 ntBASIC1.39□□□□□ -2.19
LMX1AQ8TE12 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LMX1AQ8TE12 Z75746.1-201ENST00000440243 2080 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 Y_RNA.97-201ENST00000363094 102 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 RNU6-960P-201ENST00000364056 120 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 Y_RNA.302-201ENST00000364997 102 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 SNORA4.3-201ENST00000365564 137 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 RPS20P2-201ENST00000402520 389 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 SNORD56-201ENST00000413522 71 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 MTND1P20-201ENST00000430341 950 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 HSFY7P-201ENST00000432672 318 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 HSFY8P-201ENST00000437934 318 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 RPS15AP9-201ENST00000439856 381 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AL606662.1-201ENST00000445763 553 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 HSFY5P-201ENST00000453726 309 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AL441985.1-201ENST00000457727 251 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 RNU6-953P-201ENST00000459154 107 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC020699.1-201ENST00000505161 445 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms