Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AL137161.1-201ENST00000532231 390 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL109618.2-201ENST00000605527 211 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AL121757.2-201ENST00000611223 313 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AC006133.1-201ENST00000617106 264 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AC005609.4-201ENST00000625071 447 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AC135776.4-201ENST00000624300 1904 ntBASIC2.22□□□□□ -2.05
BEST4Q8NFU0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.22□□□□□ -2.05
BEST4Q8NFU0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
BEST4Q8NFU0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNA5SP374-201ENST00000362939 125 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU6-1252P-201ENST00000363054 104 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU6-38P-201ENST00000384085 107 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNVU1-14-201ENST00000384770 164 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 MIR627-201ENST00000384979 97 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 SNORD73A-201ENST00000386062 65 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 MIR147B-201ENST00000390185 80 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU6-192P-201ENST00000391253 100 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AL138827.1-201ENST00000402666 306 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU6-648P-201ENST00000410190 107 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 Y_RNA.599-201ENST00000410489 109 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 USP9YP27-201ENST00000418455 438 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU6-333P-201ENST00000459117 107 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC112771.1-201ENST00000463581 102 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC117503.1-201ENST00000472241 394 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RPL21P99-201ENST00000480369 423 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC083904.1-201ENST00000487828 231 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 RNU4-29P-201ENST00000515943 174 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC004944.1-201ENST00000517807 3059 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 MTND4P7-201ENST00000523876 130 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 OR5AQ1P-201ENST00000527596 927 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AP003034.1-201ENST00000534621 422 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC007151.1-201ENST00000572774 483 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 AC012314.7-201ENST00000619693 93 ntBASIC2.21□□□□□ -2.06
BEST4Q8NFU0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
BEST4Q8NFU0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RNU6-428P-201ENST00000362942 107 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RNU6-942P-201ENST00000363002 107 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RNU6-266P-201ENST00000364225 107 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 SNORD116-20-201ENST00000384529 92 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MIR7-3-201ENST00000384898 110 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RNU6-908P-201ENST00000410160 94 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 Y_RNA.615-201ENST00000410769 117 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RNU6-607P-201ENST00000411283 108 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 OR9R1P-201ENST00000412200 877 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 PTGES3P4-201ENST00000426243 356 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AL358075.3-201ENST00000426289 226 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 VN1R34P-201ENST00000447387 883 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 FAM133DP-201ENST00000464802 691 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RPS29P26-201ENST00000477483 171 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC074250.1-201ENST00000511117 192 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RPL39P5-202ENST00000512505 151 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 SNORA67.7-201ENST00000516664 135 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC009163.5-201ENST00000575421 637 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC103810.1-201ENST00000579873 453 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MIR3199-1-201ENST00000582434 88 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MIR4424-201ENST00000585257 86 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AL391813.1-201ENST00000603098 260 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC245389.1-201ENST00000605141 529 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 YPEL5P2-201ENST00000605553 359 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 RMST_3.1-201ENST00000611651 109 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC026585.1-201ENST00000619582 524 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC022418.1-201ENST00000624118 445 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 CDC27P3-201ENST00000635418 1910 ntBASIC2.2□□□□□ -2.06
BEST4Q8NFU0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BEST4Q8NFU0 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
BEST4Q8NFU0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.19□□□□□ -2.06
BEST4Q8NFU0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms