Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC084781.2-201ENST00000615568 161 ntBASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 AC092628.2-201ENST00000622492 339 ntBASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 MTND4LP32-201ENST00000636111 270 ntBASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 AC099654.10-201ENST00000640395 161 ntBASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 AC006504.1-201ENST00000562493 3666 ntBASIC3.97□□□□□ -1.77
SMC1BQ8NDV3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMC1BQ8NDV3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.96□□□□□ -1.77
SMC1BQ8NDV3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMC1BQ8NDV3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
SMC1BQ8NDV3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RNY4P36-201ENST00000391116 96 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AL592148.1-201ENST00000413568 445 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AC016831.2-201ENST00000417179 352 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RPL7P37-201ENST00000425095 738 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AC098614.2-201ENST00000426040 255 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 MTCO2P12-201ENST00000427426 682 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RPL23AP14-201ENST00000468281 468 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RNU6-1153P-201ENST00000516760 105 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AP005597.4-201ENST00000526762 229 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AL121821.2-201ENST00000556081 394 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 MIR4319-201ENST00000577285 85 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 MIR6128-201ENST00000615528 109 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 U6.99-201ENST00000637524 83 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMC1BQ8NDV3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 MIR10A-201ENST00000385043 110 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 MIR887-201ENST00000401258 79 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 ATG3P1-201ENST00000419507 911 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC003685.2-201ENST00000422795 395 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL590632.1-201ENST00000424289 371 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL353705.1-201ENST00000433468 480 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL645568.3-201ENST00000433683 316 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC092798.1-201ENST00000458542 409 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL049830.2-201ENST00000480072 201 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC116337.1-201ENST00000509680 687 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 Y_RNA.676-201ENST00000516393 96 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AC133104.2-201ENST00000615272 193 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMC1BQ8NDV3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC000403.1-201ENST00000613696 3585 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 RNU6-384P-201ENST00000364900 104 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 SNORA70B-201ENST00000384210 135 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 SNORA1.3-201ENST00000384676 136 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 RNU6-95P-201ENST00000384697 107 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 U3.39-201ENST00000408569 239 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC245054.2-201ENST00000415639 319 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 HMGN2P30-201ENST00000423237 256 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 ARF4P2-201ENST00000430209 526 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC005534.2-201ENST00000431047 433 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 RPL12P25-201ENST00000455592 494 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC092436.3-201ENST00000511788 257 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 RNA5SP367-201ENST00000516557 118 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 APOOP3-201ENST00000536787 586 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 HMGB1P14-201ENST00000557424 591 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 MIR4782-201ENST00000577987 79 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AP000787.2-201ENST00000604432 568 ntBASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC1BQ8NDV3 AC090971.5-201ENST00000621102 293 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms