Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Y_RNA.668-201ENST00000516233 93 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 RNA5SP471-201ENST00000516971 106 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC069113.1-201ENST00000517763 267 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AP002404.1-201ENST00000532005 451 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC004024.1-201ENST00000549244 247 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC109446.1-201ENST00000566172 220 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC005899.2-201ENST00000584353 90 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 RNA5SP108-201ENST00000605921 117 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-85P-201ENST00000605989 107 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 MFSD8-233ENST00000641482 4860 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-596P-201ENST00000365395 98 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-1222P-201ENST00000384615 107 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-823P-201ENST00000391042 103 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 HSPE1P8-201ENST00000406997 288 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AC063979.1-201ENST00000415539 377 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 HMGB1P27-201ENST00000431429 603 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AP000873.1-201ENST00000463987 400 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AC008716.1-201ENST00000511084 513 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU1-86P-201ENST00000516108 154 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU1-107P-201ENST00000516617 154 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-635P-201ENST00000516651 102 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-307P-201ENST00000516743 106 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AL162713.1-201ENST00000604480 262 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AL606534.2-204ENST00000635008 178 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 AC091812.1-201ENST00000432235 1948 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 CDC27P3-201ENST00000635418 1910 ntBASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC44A3Q8N4M1 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-450P-201ENST00000364654 107 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.485-201ENST00000384395 102 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 DPH3P2-201ENST00000422618 250 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AL592045.1-201ENST00000429867 352 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC099799.1-201ENST00000439809 192 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 CHEK2P4-201ENST00000450340 246 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC092451.1-201ENST00000480211 153 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC006445.1-201ENST00000491925 405 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC097462.2-201ENST00000504623 481 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 MTND4LP22-201ENST00000508209 276 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC123912.5-201ENST00000605470 343 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC138627.2-201ENST00000624202 601 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 Z99571.1-201ENST00000636677 394 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 AC116096.1-201ENST00000566804 2314 ntBASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC44A3Q8N4M1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 UBE2L2-201ENST00000254302 429 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.188-201ENST00000363952 111 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 SNORA63.7-201ENST00000365579 123 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 RNU2-23P-201ENST00000410545 195 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AL030996.1-201ENST00000411430 235 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 BX276092.3-201ENST00000424182 230 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 DAP3P1-201ENST00000441522 278 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms