Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 POLR2KP2-201ENST00000438155 177 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX5Q8N196 RPL26P26-201ENST00000480251 434 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 RPS27AP10-201ENST00000496103 208 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 RNA5SP143-201ENST00000516936 115 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 AC009163.5-201ENST00000575421 637 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 AL359198.2-201ENST00000611836 194 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 MIR3529-201ENST00000637713 78 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX5Q8N196 AC090740.1-201ENST00000623193 2262 ntBASIC4.69□□□□□ -1.66
SIX5Q8N196 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX5Q8N196 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SIX5Q8N196 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX5Q8N196 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 MIR383-201ENST00000362257 73 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 Y_RNA.275-201ENST00000364726 110 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 RNU6-1175P-201ENST00000365200 107 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 RNY4P28-201ENST00000365281 93 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SIX5Q8N196 RNU6-1035P-201ENST00000384477 107 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 SNORA46.1-201ENST00000391069 153 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 SNORA11.1-201ENST00000408133 129 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 RNA5SP239-201ENST00000410218 129 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX5Q8N196 AL358232.1-201ENST00000448030 501 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 SCARNA10-201ENST00000459255 330 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 RNU6-861P-201ENST00000516745 106 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 RNU6-1212P-201ENST00000517023 104 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX5Q8N196 AC006349.1-201ENST00000555526 235 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 MIR3910-1-201ENST00000580936 111 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 MIR4444-1-201ENST00000581696 74 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 MIR4444-2-201ENST00000584390 74 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX5Q8N196 AC007496.3-201ENST00000624987 3443 ntBASIC4.68□□□□□ -1.66
SIX5Q8N196 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX5Q8N196 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SIX5Q8N196 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX5Q8N196 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SIX5Q8N196 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SIX5Q8N196 RNU6-187P-201ENST00000384139 106 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 MIR329-1-201ENST00000385028 80 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 Y_RNA.595-201ENST00000410403 105 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RPL23AP36-201ENST00000413895 458 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC078809.1-201ENST00000427601 140 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC244670.1-201ENST00000436879 112 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX5Q8N196 AC109925.1-201ENST00000478069 331 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 SNORA40.9-201ENST00000515895 93 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RNU5F-8P-201ENST00000515941 111 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 SNORD116-28-201ENST00000516123 91 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RNU6-581P-201ENST00000516214 105 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RNA5SP54-201ENST00000516951 92 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RNU6-255P-201ENST00000516957 105 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 RN7SKP289-201ENST00000517244 295 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX5Q8N196 AC011602.1-201ENST00000546484 331 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX5Q8N196 AC005176.2-201ENST00000596933 147 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC008749.1-201ENST00000597650 306 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC024220.1-201ENST00000603675 484 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC072026.1-201ENST00000605023 201 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 AC073308.1-201ENST00000623696 305 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.67□□□□□ -1.66
SIX5Q8N196 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX5Q8N196 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX5Q8N196 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SIX5Q8N196 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 MIR410-201ENST00000362222 80 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 MIR372-201ENST00000362225 67 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 Y_RNA.122-201ENST00000363331 96 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 RNU6-682P-201ENST00000363843 106 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 SNORD115-8-201ENST00000363856 82 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 SNORD115-38-201ENST00000365037 82 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 Y_RNA.331-201ENST00000365267 102 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 RNA5SP283-201ENST00000365604 119 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 SNORA36A-201ENST00000384221 132 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 U3.19-201ENST00000390893 196 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 HSPE1P12-201ENST00000412576 301 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.66□□□□□ -1.66
SIX5Q8N196 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX5Q8N196 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.66□□□□□ -1.66
SIX5Q8N196 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.66□□□□□ -1.66
SIX5Q8N196 SETP5-201ENST00000437270 562 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms