Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-840P-201ENST00000517275 65 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC034114.1-201ENST00000520293 285 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AP003733.2-201ENST00000529409 171 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC123912.5-201ENST00000605470 343 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC008962.1-201ENST00000605729 304 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 MIR3976-201ENST00000606807 139 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC112200.1-201ENST00000625015 234 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VRK3Q8IV63 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 SDAD1P2-201ENST00000441308 2028 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 Y_RNA.105-201ENST00000363182 111 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-595P-201ENST00000363944 107 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNA5SP235-201ENST00000365411 114 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 Y_RNA.533-201ENST00000384596 114 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-1179P-201ENST00000384667 107 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 Y_RNA.555-201ENST00000384673 110 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-33P-201ENST00000384793 107 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-837P-201ENST00000391056 108 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 PTMAP2-201ENST00000397627 327 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-121P-201ENST00000410525 99 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AL513331.1-201ENST00000411908 397 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VRK3Q8IV63 EIF4EP2-201ENST00000422816 654 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AL451062.2-201ENST00000427515 271 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 SNORD105B-201ENST00000458770 79 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 U3.44-201ENST00000458938 192 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-1037P-201ENST00000459571 107 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 HMGN2P13-201ENST00000476476 274 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RPL7P47-201ENST00000497299 556 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 GMPSP1-201ENST00000514075 579 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 RNU6-1231P-201ENST00000517185 103 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 AC026333.2-201ENST00000542164 106 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 RRN3P3-201ENST00000549207 578 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 TRAV37-201ENST00000553906 342 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AC004584.2-201ENST00000570407 410 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AL390123.1-201ENST00000603216 237 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 MIR1244-1-201ENST00000612829 85 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 AC006133.1-201ENST00000617106 264 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 MIR1244-3-201ENST00000635744 85 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 MIR1244-2-201ENST00000636449 85 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 Z99571.1-201ENST00000636677 394 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 MIR1244-4-202ENST00000636813 85 ntBASIC3.45□□□□□ -1.86
VRK3Q8IV63 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.45□□□□□ -1.86
VRK3Q8IV63 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 ZNF299P-201ENST00000406845 1804 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 SNORA62.3-201ENST00000365110 153 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 Y_RNA.416-201ENST00000384014 113 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 RNU2-14P-201ENST00000411053 191 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 RNU6-130P-201ENST00000411112 103 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 RN7SL594P-201ENST00000470590 287 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 TRBVB-201ENST00000477100 408 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 RNU6-1315P-201ENST00000517187 99 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 RPS29P30-201ENST00000600975 111 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC009779.6-201ENST00000603972 165 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 U73479.1-201ENST00000618062 168 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 AC022149.2-201ENST00000621061 203 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VRK3Q8IV63 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AP000560.1-201ENST00000624150 1937 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 CEP170P1-201ENST00000502249 4587 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VRK3Q8IV63 AL365440.1-201ENST00000436135 2167 ntBASIC3.44□□□□□ -1.86
VRK3Q8IV63 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms