Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 U2.17-201ENST00000611454 95 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC084782.3-201ENST00000612282 578 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC026585.1-201ENST00000619582 524 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 YWHAEP7-203ENST00000622054 312 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC006386.2-201ENST00000624491 75 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC012005.1-201ENST00000624575 75 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB1Q86U70 MIR7515-201ENST00000637837 67 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC068137.3-201ENST00000639191 341 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC073869.6-201ENST00000640656 341 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDB1Q86U70 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
LDB1Q86U70 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB1Q86U70 RNU6-7-201ENST00000364784 107 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 RNU6-1303P-201ENST00000364841 107 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 RNU6-8-201ENST00000365467 107 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 Y_RNA.402-201ENST00000383972 102 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.68□□□□□ -1.98
LDB1Q86U70 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB1Q86U70 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB1Q86U70 USP9YP27-201ENST00000418455 438 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 Z96811.1-201ENST00000445880 108 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AC006026.2-201ENST00000457376 180 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 RNU7-167P-201ENST00000459160 62 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 MRPL42P6-201ENST00000486397 371 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AC091885.1-201ENST00000506658 268 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDB1Q86U70 SNORD60.2-201ENST00000516883 86 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB1Q86U70 EIF4BP1-201ENST00000554881 351 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AL138976.2-201ENST00000563989 694 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB1Q86U70 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AL670379.10-201ENST00000604330 253 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AL137843.1-201ENST00000605078 385 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 AL670379.9-201ENST00000605428 253 ntBASIC2.68□□□□□ -1.98
LDB1Q86U70 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDB1Q86U70 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDB1Q86U70 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LDB1Q86U70 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
LDB1Q86U70 AL365361.1-201ENST00000566942 3481 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.67□□□□□ -1.98
LDB1Q86U70 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LDB1Q86U70 RNU6-942P-201ENST00000363002 107 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 RNU4-66P-201ENST00000365199 138 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 BX682237.1-201ENST00000415016 335 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 MTCO1P20-201ENST00000425366 358 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 CALM1P1-201ENST00000442082 433 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC025750.2-201ENST00000442609 450 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB1Q86U70 MTCO3P38-201ENST00000468910 766 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 CCDC34P1-201ENST00000507441 517 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 SNORA31.6-201ENST00000516241 130 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC109635.3-201ENST00000529536 185 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC136619.2-201ENST00000563361 631 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC009163.5-201ENST00000575421 637 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 MTCO3P13-201ENST00000577757 781 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.67□□□□□ -1.98
LDB1Q86U70 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AP000787.2-201ENST00000604432 568 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AC019159.1-201ENST00000605094 187 ntBASIC2.67□□□□□ -1.98
LDB1Q86U70 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 FER-210ENST00000628534 558 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB1Q86U70 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
LDB1Q86U70 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LDB1Q86U70 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU6-858P-201ENST00000362436 107 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNY4P14-201ENST00000363656 96 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU6-82P-201ENST00000363970 107 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU4-12P-201ENST00000365233 139 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU6-38P-201ENST00000384085 107 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 Y_RNA.505-201ENST00000384489 102 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AL513475.1-201ENST00000406602 315 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU6-908P-201ENST00000410160 94 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB1Q86U70 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB1Q86U70 AL121601.2-201ENST00000438019 707 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AC004383.1-201ENST00000438135 289 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB1Q86U70 MTND3P16-201ENST00000452205 344 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 RNU6-333P-201ENST00000459117 107 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms