Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MIR4700-201ENST00000578311 74 ntBASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 Z83818.1-201ENST00000603584 150 ntBASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 AC100827.5-201ENST00000615883 426 ntBASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 AL079305.1-201ENST00000623159 3008 ntBASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN4Q6PJG9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AC125257.1-201ENST00000560400 2930 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 SNORA25.1-201ENST00000362326 128 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 MIR659-201ENST00000384963 97 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 RPL23AP93-201ENST00000440847 484 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 HMGN2P10-201ENST00000448085 265 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AC012308.1-201ENST00000451232 178 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 RPL7P49-201ENST00000471402 708 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 PPBPP1-201ENST00000510807 373 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AC024405.2-202ENST00000532731 184 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 UBL5P4-201ENST00000562584 236 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 RPL7P50-201ENST00000600588 727 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 BPIFA4P-203ENST00000603168 689 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 CPHL1P-201ENST00000461341 3407 ntBASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.01□□□□□ -1.77
LRFN4Q6PJG9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRFN4Q6PJG9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LRFN4Q6PJG9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 AC079741.1-201ENST00000321498 212 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RNU5F-3P-201ENST00000363767 117 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RNVU1-6-201ENST00000364688 164 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RNU6-514P-201ENST00000384208 107 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RNU6-1145P-201ENST00000384246 107 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 Y_RNA.570-201ENST00000384750 101 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 MIR329-1-201ENST00000385028 80 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 U3.19-201ENST00000390893 196 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RN7SKP177-201ENST00000410567 355 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 YPEL5P1-201ENST00000419731 367 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 RNU6-1212P-201ENST00000517023 104 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 AL591034.3-201ENST00000605511 685 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 AL110115.1-201ENST00000614396 364 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LRFN4Q6PJG9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
LRFN4Q6PJG9 AC073073.2-201ENST00000609827 2578 ntBASIC4□□□□□ -1.77
LRFN4Q6PJG9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRFN4Q6PJG9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 ADAM3A-203ENST00000461344 2157 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNU1-35P-201ENST00000362782 153 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNU6-626P-201ENST00000363354 107 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNU6-740P-201ENST00000364734 105 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNU6-487P-201ENST00000365430 104 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 HLFP1-201ENST00000402375 499 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RN7SKP216-201ENST00000411050 312 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 Y_RNA.626-201ENST00000411288 95 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 COX6B1P7-201ENST00000430845 235 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 MTCO1P5-201ENST00000433573 344 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC244670.1-201ENST00000436879 112 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC073264.2-201ENST00000448886 166 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC012671.1-201ENST00000451912 203 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNU6-928P-201ENST00000516876 104 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 RNA5SP54-201ENST00000516951 92 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AP001781.1-201ENST00000530977 207 ntBASIC3.99□□□□□ -1.77
LRFN4Q6PJG9 AC100770.1-201ENST00000532310 322 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms