Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC020593.1-201ENST00000507399 299 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC006499.6-201ENST00000511169 607 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RNA5SP165-201ENST00000517142 115 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 CYCSP26-201ENST00000534107 320 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC068831.7-201ENST00000616954 363 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 RNU6-899P-201ENST00000363947 107 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 SNORA70.2-201ENST00000364506 135 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 U8.10-201ENST00000384260 133 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 MIR708-201ENST00000390708 88 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AC007560.1-201ENST00000426912 237 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AC005042.3-201ENST00000453230 174 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 RNU6-844P-201ENST00000517175 102 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 DNAJC19P2-201ENST00000593340 302 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 DEFB117-201ENST00000602356 141 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AP001005.3-201ENST00000622049 129 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AC068700.1-201ENST00000565862 3754 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 MFSD8-216ENST00000641147 4009 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 SRP72P2-201ENST00000344851 1979 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 AC018555.1-201ENST00000567548 1980 ntBASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXR1Q6PIV2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 RNU6-105P-201ENST00000363909 104 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 RNU6-270P-201ENST00000364131 105 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 SNORA29-201ENST00000384183 140 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 Y_RNA.563-201ENST00000384707 108 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 RNU7-197P-201ENST00000458836 62 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 RPL21P126-201ENST00000470049 478 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 AC108022.1-201ENST00000493466 478 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 AC015795.1-201ENST00000513669 327 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 AP004242.1-201ENST00000533701 349 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 CYP4A43P-201ENST00000568156 121 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 MIR4431-201ENST00000579990 94 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 MIR5096-201ENST00000583713 70 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 FAM27B-201ENST00000610601 213 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXR1Q6PIV2 AC139713.2-214ENST00000642059 1811 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 Y_RNA.172-201ENST00000363765 102 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 Y_RNA.319-201ENST00000365138 92 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RNU6-147P-201ENST00000383983 107 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RNU6-159P-201ENST00000391080 106 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 U3.22-201ENST00000391120 215 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RNU6-381P-201ENST00000391259 108 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RNA5SP44-201ENST00000410446 133 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RNU6-1199P-201ENST00000411249 104 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC138623.1-201ENST00000418060 216 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC010095.1-201ENST00000443543 144 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC092798.1-201ENST00000458542 409 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 U8.19-201ENST00000459095 133 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RPL23AP56-201ENST00000460778 453 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 Y_RNA.709-201ENST00000516952 92 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 IGKV1-32-201ENST00000519290 311 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC011603.4-201ENST00000611325 277 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 AC116096.1-201ENST00000566804 2314 ntBASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXR1Q6PIV2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
FOXR1Q6PIV2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXR1Q6PIV2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms