Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-222P-201ENST00000362438 107 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 Y_RNA.33-201ENST00000362591 102 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 Y_RNA.123-201ENST00000363338 102 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 RNU6-512P-201ENST00000364438 103 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 Y_RNA.272-201ENST00000364696 102 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 Y_RNA.488-201ENST00000384403 102 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 Y_RNA.586-201ENST00000391146 98 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 RPL7AP73-201ENST00000413490 353 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AL592148.1-201ENST00000413568 445 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 SSXP4-201ENST00000451349 245 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AP001025.1-201ENST00000486139 332 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AC025554.1-201ENST00000505641 188 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 GMPSP1-201ENST00000514075 579 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 RNA5SP471-201ENST00000516971 106 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 AC006064.5-201ENST00000541782 248 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 TVP23BP1-201ENST00000557500 617 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 ZNF826P-207ENST00000622273 1910 ntBASIC4.4□□□□□ -1.71
RNF43Q68DV7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF43Q68DV7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF43Q68DV7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF43Q68DV7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF43Q68DV7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF43Q68DV7 SNORA71.3-201ENST00000362582 128 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RNU6-395P-201ENST00000365662 106 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 RNU6-514P-201ENST00000384208 107 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RNU6-1289P-201ENST00000384431 106 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 SNORA11.2-201ENST00000408318 127 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 Z82188.1-201ENST00000436709 154 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 snoU13.24-201ENST00000458998 104 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 AC091959.1-201ENST00000495857 238 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RNU6-143P-201ENST00000516942 93 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 RN7SKP272-201ENST00000516988 232 ntBASIC4.39□□□□□ -1.71
RNF43Q68DV7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF43Q68DV7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF43Q68DV7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF43Q68DV7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF43Q68DV7 RNU6-227P-201ENST00000362865 103 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 Y_RNA.353-201ENST00000365440 108 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 RNU6-76P-201ENST00000384060 104 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 MIR186-201ENST00000384988 86 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 MIR301A-201ENST00000385261 86 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 AL356095.1-201ENST00000417217 199 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 MIR4716-201ENST00000579628 84 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 AC053481.4-201ENST00000583164 216 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 MIR6867-201ENST00000610636 67 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 AL161629.2-201ENST00000615347 275 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 AC090617.7-201ENST00000623952 126 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 AC135776.4-201ENST00000624300 1904 ntBASIC4.38□□□□□ -1.71
RNF43Q68DV7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF43Q68DV7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC100821.1-201ENST00000523153 2479 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC093535.2-201ENST00000624769 2326 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 UBE2WP1-201ENST00000362030 340 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-428P-201ENST00000362942 107 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-449P-201ENST00000383914 107 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 Y_RNA.400-201ENST00000383963 111 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-318P-201ENST00000384283 103 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-21P-201ENST00000384710 107 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-1025P-201ENST00000410629 104 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 MIR1911-201ENST00000410783 80 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AL035461.1-201ENST00000421490 332 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms