Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RPL7P54-201ENST00000438336 674 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC016691.1-201ENST00000441321 413 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 PRPS1P1-201ENST00000445305 876 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC108938.1-201ENST00000451204 136 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 snoU109.2-201ENST00000459316 135 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AP001324.2-201ENST00000461163 319 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC008571.1-201ENST00000467232 300 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 MED28P2-201ENST00000475771 317 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 RNU1-86P-201ENST00000516108 154 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 SNORA31.6-201ENST00000516241 130 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 RNU1-107P-201ENST00000516617 154 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 RN7SKP40-201ENST00000517211 242 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC104383.1-201ENST00000530297 370 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 BNIP3P6-201ENST00000549284 499 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 MIR4319-201ENST00000577285 85 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC007621.1-201ENST00000604544 437 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC011890.2-201ENST00000613393 294 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC138627.2-201ENST00000624202 601 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 SNORD37.1-201ENST00000390968 65 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AL139095.1-201ENST00000404326 391 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 CIR1P3-201ENST00000405137 479 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AL606923.1-201ENST00000406616 190 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 PGBD4P6-201ENST00000421501 610 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 Y_RNA.655-201ENST00000515919 96 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 Y_RNA.687-201ENST00000516558 91 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 MTND4P7-201ENST00000523876 130 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 MIR3117-201ENST00000584034 78 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 U2.17-201ENST00000611454 95 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 AC068137.4-201ENST00000638485 296 ntBASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
SNX30Q5VWJ9 MTND4P27-201ENST00000450813 1354 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 RNU6-487P-201ENST00000365430 104 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 RNU2-3P-201ENST00000410144 191 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC004383.1-201ENST00000438135 289 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 MTND1P34-201ENST00000438556 671 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 FDX1P2-201ENST00000450769 375 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 UBE2DNL-203ENST00000474922 222 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC091435.1-201ENST00000505442 584 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 RNU2-69P-201ENST00000516061 100 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 RNU6-506P-201ENST00000516553 94 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 SCARNA3-201ENST00000517097 143 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 CR383656.8-201ENST00000549046 145 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC008121.1-201ENST00000603244 268 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 uc_338.34-201ENST00000617467 174 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AC139792.2-201ENST00000624218 587 ntBASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX30Q5VWJ9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX30Q5VWJ9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX30Q5VWJ9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
SNX30Q5VWJ9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms