Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AL590383.1-201ENST00000428602 75 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC125611.1-201ENST00000549563 229 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AL022067.1-201ENST00000602426 454 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC084824.5-201ENST00000612009 413 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 FAM157A-202ENST00000615155 405 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 Z75746.1-201ENST00000440243 2080 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 SNORA25B-201ENST00000365507 128 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 RNU6-444P-201ENST00000383988 108 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 RNU2-36P-201ENST00000410361 191 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 MTCO1P3-201ENST00000429327 192 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 RPS26P55-201ENST00000471178 356 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 SNORA25.11-201ENST00000515935 105 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 RNU7-40P-201ENST00000516397 64 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 SCARNA15.2-201ENST00000516409 127 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 ZNF705CP-201ENST00000530515 889 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 LSM6P2-201ENST00000552208 177 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC019288.1-201ENST00000557918 224 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 MIR4661-201ENST00000582720 75 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 U3.8-201ENST00000363675 217 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 AL117342.1-201ENST00000404861 406 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 USP9YP26-201ENST00000421008 661 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 USP9YP18-201ENST00000425912 695 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.46□□□□□ -2.34
NUP188Q5SRE5 USP9YP17-201ENST00000444617 696 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 AC108729.1-201ENST00000487812 947 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.46□□□□□ -2.34
NUP188Q5SRE5 COX7A2P2-201ENST00000505291 250 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 HIGD1AP6-201ENST00000521833 279 ntBASIC0.46□□□□□ -2.34
NUP188Q5SRE5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
NUP188Q5SRE5 SNORA29-201ENST00000384183 140 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 MIR514A1-201ENST00000385133 98 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 RNA5SP501-201ENST00000410990 112 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 MTCYBP32-201ENST00000427945 1084 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 PGBD4P5-201ENST00000445958 426 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 MTND2P24-201ENST00000453434 806 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 RPL21P47-201ENST00000483696 477 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 PSMC1P5-201ENST00000512850 177 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.45□□□□□ -2.34
NUP188Q5SRE5 AC136932.1-201ENST00000574771 208 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 AC099654.5-201ENST00000636479 350 ntBASIC0.45□□□□□ -2.34
NUP188Q5SRE5 MIR32-201ENST00000384965 70 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 MIR506-201ENST00000384998 124 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC006461.1-201ENST00000412637 326 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 NDUFS5P4-201ENST00000412983 318 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC244023.1-201ENST00000426884 112 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC245102.2-201ENST00000448956 180 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC021739.1-201ENST00000559631 174 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC012213.3-201ENST00000577199 777 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC242498.1-201ENST00000604134 111 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC018618.2-201ENST00000604770 446 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AP005229.2-201ENST00000609980 697 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC243994.1-201ENST00000618627 109 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC009318.4-201ENST00000620496 486 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 MIR329-1-201ENST00000385028 80 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 NANOGP2-201ENST00000435391 727 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 MTND1P33-201ENST00000446251 917 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AL441985.1-201ENST00000457727 251 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC104692.1-201ENST00000472406 90 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.44□□□□□ -2.34
NUP188Q5SRE5 RNU4-77P-201ENST00000516692 156 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AP006587.4-201ENST00000526053 529 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC002400.1-201ENST00000569310 726 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 MIR5190-201ENST00000581537 80 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 AC024060.1-201ENST00000607052 494 ntBASIC0.44□□□□□ -2.34
NUP188Q5SRE5 MIR1267-201ENST00000408723 78 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 RNA5SP100-201ENST00000410903 110 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 RNA5SP59-201ENST00000410922 110 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 RNU6-564P-201ENST00000410983 104 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 HSPE1P13-201ENST00000451143 297 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC013267.1-201ENST00000458227 267 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC015724.1-201ENST00000478577 156 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC010409.1-201ENST00000487382 476 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AL133373.1-201ENST00000497098 94 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC005741.1-201ENST00000511094 432 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 SNORA31.17-201ENST00000516953 127 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP188Q5SRE5 AC073544.2-201ENST00000601155 540 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.43□□□□□ -2.34
NUP188Q5SRE5 SNORD33-201ENST00000362761 85 ntBASIC0.42□□□□□ -2.34
NUP188Q5SRE5 SNORD115-3-201ENST00000363100 82 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms