Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.6□□□□□ -2.31
CPSF1Q10570 NIFKP8-201ENST00000560500 874 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 BBIP1P1-201ENST00000602999 279 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC107075.1-201ENST00000613695 314 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC068787.1-201ENST00000623908 691 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC104820.1-201ENST00000624183 307 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 MIR4275-201ENST00000636486 87 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 RNU1-36P-201ENST00000365130 165 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 RNU6-968P-201ENST00000384076 107 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 Y_RNA.433-201ENST00000384089 102 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 MIR1262-201ENST00000408276 93 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 RNU2-70P-201ENST00000410718 179 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CPSF1Q10570 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
CPSF1Q10570 NCOR1P3-201ENST00000420479 303 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 FAM204CP-201ENST00000424489 642 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.59□□□□□ -2.31
CPSF1Q10570 AC005345.1-201ENST00000431868 217 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 NANOGP2-201ENST00000435391 727 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.59□□□□□ -2.31
CPSF1Q10570 PTGES3P1-201ENST00000439531 483 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.59□□□□□ -2.31
CPSF1Q10570 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.59□□□□□ -2.31
CPSF1Q10570 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.59□□□□□ -2.31
CPSF1Q10570 AC017037.3-201ENST00000625016 472 ntBASIC0.59□□□□□ -2.31
CPSF1Q10570 AC092125.1-201ENST00000562568 1995 ntBASIC0.59□□□□□ -2.32
CPSF1Q10570 MTND4P16-201ENST00000466108 1367 ntBASIC0.59□□□□□ -2.32
CPSF1Q10570 RNU6-222P-201ENST00000362438 107 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 RNU1-124P-201ENST00000363861 145 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 RNU6-115P-201ENST00000364310 107 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 AC069282.1-201ENST00000411911 526 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.58□□□□□ -2.32
CPSF1Q10570 PGBD4P5-201ENST00000445958 426 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 DUXAP8-207ENST00000456786 622 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 AL160314.1-201ENST00000490836 438 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.58□□□□□ -2.32
CPSF1Q10570 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 AC079598.5-201ENST00000547460 117 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 MIR4661-201ENST00000582720 75 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 NDUFA8P1-201ENST00000605525 367 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.58□□□□□ -2.32
CPSF1Q10570 AL159972.1-201ENST00000625150 448 ntBASIC0.58□□□□□ -2.32
CPSF1Q10570 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.58□□□□□ -2.32
CPSF1Q10570 SNORA48.1-201ENST00000390879 135 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 AL117342.1-201ENST00000404861 406 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 RPL26P27-201ENST00000414397 437 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 AC027119.1-201ENST00000440877 241 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 NDUFA5P7-201ENST00000452914 242 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 HMGN2P9-201ENST00000476875 229 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 AC079140.2-201ENST00000506193 142 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CPSF1Q10570 SNORD116-28-201ENST00000516123 91 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 NRON-201ENST00000517270 370 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CPSF1Q10570 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.57□□□□□ -2.32
CPSF1Q10570 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.57□□□□□ -2.32
CPSF1Q10570 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF1Q10570 AC004805.2-201ENST00000605382 482 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF1Q10570 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CPSF1Q10570 AL138713.1-201ENST00000624026 2130 ntBASIC0.57□□□□□ -2.32
CPSF1Q10570 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CPSF1Q10570 SNORD33-201ENST00000362761 85 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 RNU6-1164P-201ENST00000364428 107 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
CPSF1Q10570 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF1Q10570 MIR1267-201ENST00000408723 78 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AL353621.1-201ENST00000418219 243 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AC139712.2-201ENST00000424302 339 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 MEMO1P3-201ENST00000459811 302 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AC112771.1-201ENST00000463581 102 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 MTCO1P31-201ENST00000506355 492 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 SCARNA16.2-201ENST00000516520 172 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 SNORA31.17-201ENST00000516953 127 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AC136628.3-201ENST00000521868 290 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF1Q10570 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF1Q10570 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF1Q10570 BNIP3P27-201ENST00000599991 412 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AC073544.2-201ENST00000601155 540 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.56□□□□□ -2.32
CPSF1Q10570 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.56□□□□□ -2.32
CPSF1Q10570 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.56□□□□□ -2.32
CPSF1Q10570 AC079416.3-201ENST00000624479 549 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 MTCO1P18-201ENST00000455518 1419 ntBASIC0.56□□□□□ -2.32
CPSF1Q10570 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
CPSF1Q10570 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CPSF1Q10570 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CPSF1Q10570 MIR302D-201ENST00000362275 68 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 RNU6-414P-201ENST00000363705 104 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 RNU6-819P-201ENST00000364116 107 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 SNORD14D-201ENST00000384390 87 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 MIR506-201ENST00000384998 124 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 MIR100-201ENST00000385259 80 ntBASIC0.55□□□□□ -2.32
CPSF1Q10570 CCNG1P1-201ENST00000406783 885 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms