Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU2-9P-201ENST00000410194 145 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 Z85995.1-201ENST00000415547 335 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 MTCYBP5-201ENST00000423752 1135 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 GTF2IP20-201ENST00000431663 360 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AL606489.2-201ENST00000433886 234 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP4Q07065 RPS20P22-201ENST00000473700 357 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.14□□□□□ -2.07
CKAP4Q07065 AC105417.1-201ENST00000514691 285 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-718P-201ENST00000516166 105 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-835P-201ENST00000516974 104 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP4Q07065 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 DPPA3P3-201ENST00000603842 430 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AC093788.1-201ENST00000609356 927 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AC007014.2-201ENST00000615581 479 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CKAP4Q07065 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CKAP4Q07065 Y_RNA.248-201ENST00000364501 109 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 Y_RNA.256-201ENST00000364594 104 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU6-1283P-201ENST00000365314 105 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 Y_RNA.402-201ENST00000383972 102 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 SNORD115-47-201ENST00000391226 86 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 BTF3P7-201ENST00000407097 488 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU6-908P-201ENST00000410160 94 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU6-387P-201ENST00000411331 105 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CKAP4Q07065 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AL356867.1-201ENST00000429623 299 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 TAAR7P-201ENST00000436141 242 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.13□□□□□ -2.07
CKAP4Q07065 RPL7P54-201ENST00000438336 674 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RBMX2P4-201ENST00000441256 376 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC016691.1-201ENST00000441321 413 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 NEFMP1-201ENST00000443423 1006 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.13□□□□□ -2.07
CKAP4Q07065 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU7-182P-201ENST00000459009 62 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU6-261P-201ENST00000459506 102 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 GMFBP1-201ENST00000467831 427 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 MTAPP1-201ENST00000489154 819 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC109927.2-201ENST00000506416 303 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC098591.2-201ENST00000510152 315 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU4-29P-201ENST00000515943 174 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 RNU6-1178P-201ENST00000516674 107 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AP005435.4-201ENST00000529514 284 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC109635.3-201ENST00000529536 185 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AC234778.2-201ENST00000566241 354 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 SNORA59B-202ENST00000578183 701 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC024220.1-201ENST00000603675 484 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC013553.2-201ENST00000604244 589 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AL589994.2-201ENST00000621124 579 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC011155.2-201ENST00000623202 216 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.13□□□□□ -2.07
CKAP4Q07065 MTND5P42-201ENST00000637720 498 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.13□□□□□ -2.07
CKAP4Q07065 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.13□□□□□ -2.07
CKAP4Q07065 AC103710.2-202ENST00000641454 2853 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 AC006020.1-201ENST00000420179 1854 ntBASIC2.13□□□□□ -2.07
CKAP4Q07065 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CKAP4Q07065 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.12□□□□□ -2.07
CKAP4Q07065 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CKAP4Q07065 RNU6-179P-201ENST00000363350 107 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RNU6-1090P-201ENST00000364065 94 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 SNORD115-7-201ENST00000365306 82 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
CKAP4Q07065 MIR128-1-201ENST00000384921 82 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 MIR1277-201ENST00000408536 78 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AL109913.1-201ENST00000421173 514 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC099548.1-201ENST00000421443 426 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 MTCO1P20-201ENST00000425366 358 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms