Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL022345.1-201ENST00000607292 135 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL391597.1-201ENST00000618707 694 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
HSPG2P98160 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
HSPG2P98160 SNX3P1X-201ENST00000414887 175 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 EIF1P1-201ENST00000421436 341 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 C1DP1-201ENST00000426049 402 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 AC108729.1-201ENST00000487812 947 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HSPG2P98160 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 AC111000.5-201ENST00000506559 1178 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RNA5SP137-201ENST00000516833 135 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.13□□□□□ -2.39
HSPG2P98160 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 AC073410.2-201ENST00000603240 332 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AP000403.1-201ENST00000603349 851 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 MIR6516-201ENST00000630554 81 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 MTND2P41-201ENST00000637599 773 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL359854.1-201ENST00000614203 1594 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
HSPG2P98160 U3.9-201ENST00000363823 204 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 RNU6-611P-201ENST00000384276 104 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 RNU6-488P-201ENST00000515918 99 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC022616.2-201ENST00000523185 300 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 AC022254.1-201ENST00000567857 235 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC008121.1-201ENST00000603244 268 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC018618.2-201ENST00000604770 446 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 Y_RNA.185-201ENST00000363894 100 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 SNORD114-3-201ENST00000364969 75 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 RNU6-514P-201ENST00000384208 107 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 MIR325-201ENST00000385260 98 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC092047.1-201ENST00000424997 240 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC006512.1-201ENST00000468816 291 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 HSPA8P13-201ENST00000523715 472 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AP001893.2-201ENST00000526949 202 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC023158.1-201ENST00000561632 1025 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC007151.1-201ENST00000572774 483 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 FARSBP1-201ENST00000435808 1778 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 MIR218-1-201ENST00000384999 110 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 RNU11-3P-201ENST00000391111 133 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 RNA5SP501-201ENST00000410990 112 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.12□□□□□ -2.39
HSPG2P98160 NCOR1P3-201ENST00000420479 303 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC119618.1-201ENST00000434191 222 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.12□□□□□ -2.39
HSPG2P98160 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.12□□□□□ -2.39
HSPG2P98160 COX6CP6-201ENST00000490840 228 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.12□□□□□ -2.39
HSPG2P98160 AC067904.2-201ENST00000517322 1283 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC107953.1-201ENST00000522216 297 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 RNY1P9-201ENST00000532431 109 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 AC004492.1-201ENST00000607036 742 ntBASIC0.12□□□□□ -2.39
HSPG2P98160 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.12□□□□□ -2.39
HSPG2P98160 RNU6-1226P-201ENST00000384317 107 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 SNORA25-201ENST00000384384 134 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 AL355615.1-201ENST00000406187 641 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
HSPG2P98160 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
HSPG2P98160 snoU13.9-201ENST00000458927 103 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 HMGB1P36-201ENST00000487709 576 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 RNU6-1308P-201ENST00000516817 103 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 AC090115.3-201ENST00000553218 849 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 AL365204.3-201ENST00000612448 685 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
HSPG2P98160 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
HSPG2P98160 Y_RNA.559-201ENST00000384686 107 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 NDUFS5P1-201ENST00000405668 289 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 USP9YP26-201ENST00000421008 661 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 USP9YP18-201ENST00000425912 695 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 USP9YP24-201ENST00000434374 697 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 USP9YP17-201ENST00000444617 696 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.11□□□□□ -2.39
HSPG2P98160 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.11□□□□□ -2.39
HSPG2P98160 AC004987.4-201ENST00000603383 338 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.11□□□□□ -2.39
HSPG2P98160 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.11□□□□□ -2.39
HSPG2P98160 AC141557.1-201ENST00000540982 400 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.11□□□□□ -2.39
HSPG2P98160 AC124947.2-202ENST00000552735 133 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 AC021739.1-201ENST00000559631 174 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 MIR4504-201ENST00000577413 92 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 MIR4645-201ENST00000583158 77 ntBASIC0.11□□□□□ -2.39
HSPG2P98160 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
HSPG2P98160 RNU6-98P-201ENST00000384173 107 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 Y_RNA.468-201ENST00000384298 102 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms