Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.97□□□□□ -2.09
CCNA1P78396 AL031281.1-201ENST00000604049 488 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AL358072.1-201ENST00000604156 575 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AC024933.1-201ENST00000608472 348 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AC022960.3-201ENST00000619794 441 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 AC091965.5-201ENST00000624785 342 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 Z99571.1-201ENST00000636677 394 ntBASIC1.97□□□□□ -2.09
CCNA1P78396 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCNA1P78396 RNU1-57P-201ENST00000384491 166 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.96□□□□□ -2.1
CCNA1P78396 RNU6-584P-201ENST00000410350 95 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
CCNA1P78396 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNA1P78396 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNA1P78396 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNA1P78396 USP9YP15-201ENST00000442391 422 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.96□□□□□ -2.1
CCNA1P78396 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCNA1P78396 AC020699.1-201ENST00000505161 445 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 TPT1P8-201ENST00000510120 555 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 SNORA31.19-201ENST00000517079 126 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 RNU6-586P-201ENST00000517265 104 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AC009902.1-201ENST00000519351 183 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNA1P78396 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNA1P78396 AP001981.2-201ENST00000603241 418 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 ELOCP5-201ENST00000604924 333 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AC018638.7-201ENST00000605836 1114 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AC027449.1-201ENST00000608890 407 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AL355472.4-201ENST00000610233 626 ntBASIC1.96□□□□□ -2.1
CCNA1P78396 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 RNY4P24-201ENST00000362735 96 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 RNU2-62P-201ENST00000410868 191 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC138623.1-201ENST00000418060 216 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 AL591704.1-201ENST00000432574 275 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.95□□□□□ -2.1
CCNA1P78396 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.95□□□□□ -2.1
CCNA1P78396 SSXP1-201ENST00000453640 473 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 RPL7P43-201ENST00000478876 753 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC005840.1-201ENST00000498412 377 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 RNU5A-4P-201ENST00000516588 111 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC109329.1-201ENST00000518744 317 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 MTATP6P15-201ENST00000527233 835 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC136619.2-201ENST00000563361 631 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 BNIP3P40-201ENST00000596017 556 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 RPL30P11-203ENST00000598995 310 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC073410.2-201ENST00000603240 332 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC105148.1-201ENST00000604961 409 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 AC013244.3-201ENST00000605614 388 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CCNA1P78396 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
CCNA1P78396 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.95□□□□□ -2.1
CCNA1P78396 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.95□□□□□ -2.1
CCNA1P78396 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCNA1P78396 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCNA1P78396 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.95□□□□□ -2.1
CCNA1P78396 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCNA1P78396 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 Y_RNA.302-201ENST00000364997 102 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 AL133475.1-201ENST00000404414 305 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
CCNA1P78396 AC018868.1-201ENST00000491307 315 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 AC109927.2-201ENST00000506416 303 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 RNU6-677P-201ENST00000516914 101 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 RNU6-1315P-201ENST00000517187 99 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.94□□□□□ -2.1
CCNA1P78396 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 SNORD53B-201ENST00000577887 78 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 MIR3618-201ENST00000580330 88 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNA1P78396 BNIP3P25-201ENST00000596023 559 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 AC007363.1-201ENST00000604736 620 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 TUSC7.1-201ENST00000610969 165 ntBASIC1.94□□□□□ -2.1
CCNA1P78396 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNA1P78396 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms