Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC108667.1-201ENST00000428618 249 ntBASIC1.33□□□□□ -2.2
SKP1P63208 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.33□□□□□ -2.2
SKP1P63208 AL591704.1-201ENST00000432574 275 ntBASIC1.33□□□□□ -2.2
SKP1P63208 MTCO3P5-201ENST00000433620 714 ntBASIC1.33□□□□□ -2.2
SKP1P63208 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
SKP1P63208 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.33□□□□□ -2.2
SKP1P63208 NEFMP1-201ENST00000443423 1006 ntBASIC1.33□□□□□ -2.2
SKP1P63208 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
SKP1P63208 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.33□□□□□ -2.2
SKP1P63208 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.33□□□□□ -2.2
SKP1P63208 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.33□□□□□ -2.2
SKP1P63208 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
SKP1P63208 SUB1P3-201ENST00000564581 315 ntBASIC1.33□□□□□ -2.2
SKP1P63208 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.33□□□□□ -2.2
SKP1P63208 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.33□□□□□ -2.2
SKP1P63208 AC097468.3-201ENST00000607956 456 ntBASIC1.33□□□□□ -2.2
SKP1P63208 Z82243.1-201ENST00000609432 473 ntBASIC1.33□□□□□ -2.2
SKP1P63208 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
SKP1P63208 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.33□□□□□ -2.2
SKP1P63208 AC092125.1-201ENST00000562568 1995 ntBASIC1.32□□□□□ -2.2
SKP1P63208 ZNF29P-201ENST00000225587 168 ntBASIC1.32□□□□□ -2.2
SKP1P63208 RNU6-655P-201ENST00000362858 107 ntBASIC1.32□□□□□ -2.2
SKP1P63208 RNU4-51P-201ENST00000364206 140 ntBASIC1.32□□□□□ -2.2
SKP1P63208 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.32□□□□□ -2.2
SKP1P63208 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SKP1P63208 RNU6-203P-201ENST00000384038 104 ntBASIC1.32□□□□□ -2.2
SKP1P63208 RNU6-224P-201ENST00000384055 107 ntBASIC1.32□□□□□ -2.2
SKP1P63208 RPS12P24-201ENST00000412619 387 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AC083875.1-201ENST00000419509 405 ntBASIC1.32□□□□□ -2.2
SKP1P63208 USP9YP11-201ENST00000427537 717 ntBASIC1.32□□□□□ -2.2
SKP1P63208 MTND4P25-201ENST00000441039 533 ntBASIC1.32□□□□□ -2.2
SKP1P63208 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
SKP1P63208 RNU6-1315P-201ENST00000517187 99 ntBASIC1.32□□□□□ -2.2
SKP1P63208 MTND1P36-201ENST00000522384 936 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AP004607.1-201ENST00000524456 203 ntBASIC1.32□□□□□ -2.2
SKP1P63208 DEFB108A-201ENST00000530110 222 ntBASIC1.32□□□□□ -2.2
SKP1P63208 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SKP1P63208 TRAV32-201ENST00000553993 340 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AL136520.1-202ENST00000555494 763 ntBASIC1.32□□□□□ -2.2
SKP1P63208 BNIP3P30-201ENST00000601184 574 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AC012065.4-201ENST00000602445 679 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AC123912.5-201ENST00000605470 343 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AC004908.3-201ENST00000610248 625 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AL512506.1-201ENST00000613918 449 ntBASIC1.32□□□□□ -2.2
SKP1P63208 AL512643.1-201ENST00000635735 524 ntBASIC1.32□□□□□ -2.2
SKP1P63208 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.31□□□□□ -2.2
SKP1P63208 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SKP1P63208 RNU6-858P-201ENST00000362436 107 ntBASIC1.31□□□□□ -2.2
SKP1P63208 RNU4-13P-201ENST00000364019 141 ntBASIC1.31□□□□□ -2.2
SKP1P63208 RNU6-701P-201ENST00000384059 107 ntBASIC1.31□□□□□ -2.2
SKP1P63208 MIR29B2-201ENST00000385055 81 ntBASIC1.31□□□□□ -2.2
SKP1P63208 RNU6-278P-201ENST00000390945 109 ntBASIC1.31□□□□□ -2.2
SKP1P63208 CBX3P9-201ENST00000402326 552 ntBASIC1.31□□□□□ -2.2
SKP1P63208 RN7SKP266-201ENST00000410232 287 ntBASIC1.31□□□□□ -2.2
SKP1P63208 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AL035666.1-201ENST00000446195 348 ntBASIC1.31□□□□□ -2.2
SKP1P63208 EEF1E1P1-201ENST00000446998 430 ntBASIC1.31□□□□□ -2.2
SKP1P63208 ZNF886P-201ENST00000450781 723 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AC012308.1-201ENST00000451232 178 ntBASIC1.31□□□□□ -2.2
SKP1P63208 snoU13.9-201ENST00000458927 103 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AC005908.1-201ENST00000468701 347 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AL121594.1-201ENST00000475906 575 ntBASIC1.31□□□□□ -2.2
SKP1P63208 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
SKP1P63208 RNA5SP216-201ENST00000516111 123 ntBASIC1.31□□□□□ -2.2
SKP1P63208 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
SKP1P63208 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.31□□□□□ -2.2
SKP1P63208 AP003034.1-201ENST00000534621 422 ntBASIC1.31□□□□□ -2.2
SKP1P63208 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SKP1P63208 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.31□□□□□ -2.2
SKP1P63208 ARL2BPP2-201ENST00000550907 489 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AC023813.2-201ENST00000564321 469 ntBASIC1.31□□□□□ -2.2
SKP1P63208 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
SKP1P63208 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SKP1P63208 BNIP3P26-201ENST00000600827 554 ntBASIC1.31□□□□□ -2.2
SKP1P63208 MTATP6P2-201ENST00000603319 678 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.31□□□□□ -2.2
SKP1P63208 AC092574.1-201ENST00000609771 420 ntBASIC1.31□□□□□ -2.2
SKP1P63208 AL136313.1-201ENST00000624804 202 ntBASIC1.31□□□□□ -2.2
SKP1P63208 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
SKP1P63208 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
SKP1P63208 RNU6-1210P-201ENST00000363775 107 ntBASIC1.3□□□□□ -2.2
SKP1P63208 RNU5A-8P-201ENST00000364102 114 ntBASIC1.3□□□□□ -2.2
SKP1P63208 Y_RNA.534-201ENST00000384599 112 ntBASIC1.3□□□□□ -2.2
SKP1P63208 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
SKP1P63208 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
SKP1P63208 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.3□□□□□ -2.2
SKP1P63208 RNU4-62P-201ENST00000410125 130 ntBASIC1.3□□□□□ -2.2
SKP1P63208 AC074117.2-201ENST00000417130 397 ntBASIC1.3□□□□□ -2.2
SKP1P63208 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.3□□□□□ -2.2
SKP1P63208 MTCO1P27-201ENST00000448269 226 ntBASIC1.3□□□□□ -2.2
SKP1P63208 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SKP1P63208 AC108059.3-201ENST00000456388 214 ntBASIC1.3□□□□□ -2.2
SKP1P63208 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.3□□□□□ -2.2
SKP1P63208 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
SKP1P63208 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
SKP1P63208 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.3□□□□□ -2.2
SKP1P63208 AC087441.2-201ENST00000529141 262 ntBASIC1.3□□□□□ -2.2
SKP1P63208 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms