Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 snoU109.1-201ENST00000459339 135 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 RPL31P41-201ENST00000477967 372 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK4P57078 FAM92A1P2-202ENST00000504766 877 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 SUMO2P6-201ENST00000505273 288 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AC091133.4-201ENST00000511142 308 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.38□□□□□ -2.03
RIPK4P57078 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK4P57078 RNU6-430P-201ENST00000517078 107 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AP000907.2-201ENST00000530827 353 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AC016957.1-201ENST00000534895 309 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.38□□□□□ -2.03
RIPK4P57078 ANP32BP3-201ENST00000559213 706 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AL356432.3-201ENST00000568952 465 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 MIR3167-201ENST00000579623 85 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 AC136475.10-201ENST00000620253 385 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
RIPK4P57078 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK4P57078 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK4P57078 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
RIPK4P57078 SNORA16.1-201ENST00000364597 132 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 RNU6-282P-201ENST00000365357 103 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 RNU6-517P-201ENST00000384362 110 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AL513475.1-201ENST00000406602 315 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK4P57078 AC098614.2-201ENST00000426040 255 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AL358075.3-201ENST00000426289 226 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 MTND1P4-201ENST00000435196 415 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 TIMM9P1-201ENST00000436122 256 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 SNRPEP9-201ENST00000436794 238 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 USP9YP15-201ENST00000442391 422 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.37□□□□□ -2.03
RIPK4P57078 RN7SL274P-201ENST00000492268 272 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AC105252.1-201ENST00000503089 286 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.37□□□□□ -2.03
RIPK4P57078 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.37□□□□□ -2.03
RIPK4P57078 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.37□□□□□ -2.03
RIPK4P57078 RN7SKP298-201ENST00000515950 94 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 RNU6-390P-201ENST00000516259 103 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 Y_RNA.672-201ENST00000516289 104 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.37□□□□□ -2.03
RIPK4P57078 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK4P57078 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK4P57078 HMGN2P15-201ENST00000585707 270 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 RNU6-87P-201ENST00000607561 108 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK4P57078 AC108479.2-201ENST00000617314 601 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AL031601.2-202ENST00000622650 282 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 AL359740.1-201ENST00000624340 592 ntBASIC2.37□□□□□ -2.03
RIPK4P57078 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.37□□□□□ -2.03
RIPK4P57078 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
RIPK4P57078 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.36□□□□□ -2.03
RIPK4P57078 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RIPK4P57078 Y_RNA.554-201ENST00000384672 102 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 RNU6-278P-201ENST00000390945 109 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 UBE2V1P10-201ENST00000414685 269 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 RPS3AP44-201ENST00000425466 790 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 RPL31P35-201ENST00000431058 377 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.36□□□□□ -2.03
RIPK4P57078 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.36□□□□□ -2.03
RIPK4P57078 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.36□□□□□ -2.03
RIPK4P57078 RPL12P25-201ENST00000455592 494 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 SRRM1P2-201ENST00000464531 1192 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC107626.1-201ENST00000471084 183 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.36□□□□□ -2.03
RIPK4P57078 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.36□□□□□ -2.03
RIPK4P57078 RNA5SP290-201ENST00000517133 127 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 MTND1P5-201ENST00000517906 940 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.36□□□□□ -2.03
RIPK4P57078 MTCO2P4-201ENST00000517968 247 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.36□□□□□ -2.03
RIPK4P57078 RPS3AP4-201ENST00000555161 764 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.36□□□□□ -2.03
RIPK4P57078 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.36□□□□□ -2.03
RIPK4P57078 MIR3146-201ENST00000580367 79 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC005498.1-201ENST00000592125 465 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 KC877982.1-201ENST00000602313 470 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC107304.1-201ENST00000604229 296 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL161798.1-201ENST00000604630 131 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.36□□□□□ -2.03
RIPK4P57078 UCA1.1-201ENST00000620952 75 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC138649.3-201ENST00000622154 254 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.36□□□□□ -2.03
RIPK4P57078 OR5AK4P-201ENST00000635912 903 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC068137.3-201ENST00000639191 341 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AC073869.6-201ENST00000640656 341 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
RIPK4P57078 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
RIPK4P57078 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RIPK4P57078 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RIPK4P57078 RNU6-884P-201ENST00000363889 107 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 Y_RNA.245-201ENST00000364493 95 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 SNORA68.1-201ENST00000364537 132 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 MIR767-201ENST00000390228 109 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 MIR548F1-201ENST00000408667 84 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 RNU2-40P-201ENST00000410833 196 ntBASIC2.35□□□□□ -2.03
RIPK4P57078 AC023141.4-201ENST00000412031 328 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms