Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LIM2P55344 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LIM2P55344 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
LIM2P55344 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.08
LIM2P55344 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.09□□□□□ -2.08
LIM2P55344 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.08□□□□□ -2.08
LIM2P55344 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LIM2P55344 RNU6-1103P-201ENST00000384150 107 ntBASIC2.08□□□□□ -2.08
LIM2P55344 RNU6-72P-201ENST00000384285 79 ntBASIC2.08□□□□□ -2.08
LIM2P55344 MIR578-201ENST00000384828 96 ntBASIC2.08□□□□□ -2.08
LIM2P55344 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LIM2P55344 BX295541.1-201ENST00000417774 250 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.08□□□□□ -2.08
LIM2P55344 BX276092.3-201ENST00000424182 230 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AL596276.1-201ENST00000434465 418 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC004383.1-201ENST00000438135 289 ntBASIC2.08□□□□□ -2.08
LIM2P55344 RPS15AP9-201ENST00000439856 381 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.08□□□□□ -2.08
LIM2P55344 AL360271.2-201ENST00000447710 161 ntBASIC2.08□□□□□ -2.08
LIM2P55344 C1DP4-201ENST00000455429 424 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.08□□□□□ -2.08
LIM2P55344 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.08□□□□□ -2.08
LIM2P55344 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.08□□□□□ -2.08
LIM2P55344 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
LIM2P55344 AC010424.1-201ENST00000506336 297 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC079140.5-201ENST00000507882 310 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC010486.1-201ENST00000511793 424 ntBASIC2.08□□□□□ -2.08
LIM2P55344 RPL23AP94-201ENST00000512518 302 ntBASIC2.08□□□□□ -2.08
LIM2P55344 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
LIM2P55344 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.08□□□□□ -2.08
LIM2P55344 OR4R1P-201ENST00000529879 463 ntBASIC2.08□□□□□ -2.08
LIM2P55344 OR5AL2P-201ENST00000532185 920 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.08□□□□□ -2.08
LIM2P55344 SNRPGP18-201ENST00000553000 214 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC023824.2-201ENST00000566185 400 ntBASIC2.08□□□□□ -2.08
LIM2P55344 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.08□□□□□ -2.08
LIM2P55344 PIGPP4-201ENST00000584447 307 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AL021997.1-201ENST00000605757 193 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC069294.1-201ENST00000608397 350 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AP001596.2-201ENST00000608410 312 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC096772.1-201ENST00000609146 564 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC009509.4-201ENST00000619202 509 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC136475.10-201ENST00000620253 385 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.08□□□□□ -2.08
LIM2P55344 AC011155.2-201ENST00000623202 216 ntBASIC2.08□□□□□ -2.08
LIM2P55344 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.08□□□□□ -2.08
LIM2P55344 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
LIM2P55344 CKAP2P1-201ENST00000555477 2049 ntBASIC2.07□□□□□ -2.08
LIM2P55344 OR4G2P-201ENST00000328113 903 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNU6-1120P-201ENST00000362988 108 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNU6-220P-201ENST00000390919 107 ntBASIC2.07□□□□□ -2.08
LIM2P55344 CIR1P3-201ENST00000405137 479 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNA5SP111-201ENST00000411386 101 ntBASIC2.07□□□□□ -2.08
LIM2P55344 CDK8P2-201ENST00000415020 547 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.07□□□□□ -2.08
LIM2P55344 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
LIM2P55344 MTCO2P11-201ENST00000431069 680 ntBASIC2.07□□□□□ -2.08
LIM2P55344 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.07□□□□□ -2.08
LIM2P55344 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.07□□□□□ -2.08
LIM2P55344 AL356010.1-201ENST00000456364 102 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AP001324.2-201ENST00000461163 319 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RPL7P43-201ENST00000478876 753 ntBASIC2.07□□□□□ -2.08
LIM2P55344 MRPL42P6-201ENST00000486397 371 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC011005.2-201ENST00000487324 359 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC090096.1-201ENST00000489168 390 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC010493.1-201ENST00000513479 292 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RN7SKP298-201ENST00000515950 94 ntBASIC2.07□□□□□ -2.08
LIM2P55344 RNA5SP503-201ENST00000517047 117 ntBASIC2.07□□□□□ -2.08
LIM2P55344 CR383656.8-201ENST00000549046 145 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC026464.5-201ENST00000562497 722 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC009163.5-201ENST00000575421 637 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
LIM2P55344 NBR2-204ENST00000587322 63 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC010620.1-201ENST00000601088 1102 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AL670379.4-201ENST00000605279 254 ntBASIC2.07□□□□□ -2.08
LIM2P55344 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.07□□□□□ -2.08
LIM2P55344 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AL359740.1-201ENST00000624340 592 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC064859.1-201ENST00000624741 174 ntBASIC2.07□□□□□ -2.08
LIM2P55344 AC080100.1-201ENST00000624239 5356 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AL139276.1-201ENST00000311910 1001 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-1287P-201ENST00000362914 107 ntBASIC2.06□□□□□ -2.08
LIM2P55344 SNORA62.1-201ENST00000364287 154 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-282P-201ENST00000365357 103 ntBASIC2.06□□□□□ -2.08
LIM2P55344 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.06□□□□□ -2.08
LIM2P55344 RNU5A-6P-201ENST00000384136 116 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-456P-201ENST00000384493 107 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-1060P-201ENST00000384664 107 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-1179P-201ENST00000384667 107 ntBASIC2.06□□□□□ -2.08
LIM2P55344 MIR10A-201ENST00000385043 110 ntBASIC2.06□□□□□ -2.08
LIM2P55344 RNU6-550P-201ENST00000391057 101 ntBASIC2.06□□□□□ -2.08
LIM2P55344 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
LIM2P55344 Z98742.3-201ENST00000418637 326 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 MTCO2P34-201ENST00000421994 607 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.06□□□□□ -2.08
LIM2P55344 RPS3AP44-201ENST00000425466 790 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms